RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 DNAI2Q9GZS0 605 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ANO2Q9NQ90 1003 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 SEC63Q9UGP8 760 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 XDHP47989 1333 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 TTF1Q15361 905 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ZYXQ15942 572 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 RALYLQ86SE5 291 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 MICALL2Q8IY33 904 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 FEZ2Q9UHY8 353 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 TTF2Q9UNY4 1162 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ANXA1P04083 346 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 XBP1P17861 261 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 EPS15P42566 896 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ANKRD45Q5TZF3 282 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 RUFY2Q8WXA3 655 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 CNOT7Q9UIV1 285 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 PNMA3Q9UL41 463 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 MAGEB6P1A0A0J9YX57 407 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 SURF6O75683 361 aaKnown RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 IL6STP40189 918 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 C1QTNF8P60827 252 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 PPP4R3AQ6IN85 833 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 NCAPG2Q86XI2 1143 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 KCNV2Q8TDN2 545 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 TEKT1Q969V4 418 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 FAM89AQ96GI7 184 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 RWDD1Q9H446 243 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 SH2D4AQ9H788 454 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 DENND2AQ9ULE3 1009 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 C4BP0C0L5 1744 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 NRAPQ86VF7 1730 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 OFD1O75665 1012 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 PLCG2P16885 1265 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 SLC9C1Q4G0N8 1177 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 DPP9Q86TI2 863 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 KIAA0825Q8IV33 1275 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 CAMKK2Q96RR4 588 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 BRMS1Q9HCU9 246 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 MBIPQ9NS73 344 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 BBOX1O75936 387 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 EXOSC9Q06265 439 aaKnown RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 ERO1AQ96HE7 468 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 RBM27Q9P2N5 1060 aaKnown RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 ABCC6O95255 1503 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 KBTBD13C9JR72 458 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 NEBLO76041 1014 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 TSPY3P0CV98 308 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 TSPY8P0CW00 308 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 FCGRTP55899 365 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 BRDTQ58F21 947 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 MFSD14CQ5VZR4 134 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 MCTP1Q6DN14 999 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 USP50Q70EL3 339 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 GPIHBP1Q8IV16 184 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 EXOC8Q8IYI6 725 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 TRIM47Q96LD4 638 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 USP40Q9NVE5 1235 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 SH3TC1Q8TE82 1336 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 LIG1P18858 919 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 GRAPQ13588 217 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 HELBQ8NG08 1087 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 GRAPLQ8TC17 118 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 PIBF1Q8WXW3 757 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 SYAP1Q96A49 352 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-208ENST00000508342 LRRCC1Q9C099 1032 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 MYO3BQ8WXR4 1341 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 HEG1Q9ULI3 1381 aa3.48□□□□□ -1.85
NEDD4-208ENST00000508342 ZBED4O75132 1171 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 BMS1Q14692 1282 aaKnown RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 NAA16Q6N069 864 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 ELP3Q9H9T3 547 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 ADAMTS8Q9UP79 889 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 SPATA31E1Q6ZUB1 1445 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 TRPM3Q9HCF6 1732 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 TAF5LO75529 589 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 TOMM70O94826 608 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CSPG5O95196 566 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 ZKSCAN1P17029 563 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 DESP17661 470 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CYP7A1P22680 504 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 TNNT3P45378 269 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 HINFPQ9BQA5 517 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 HOOK1Q9UJC3 728 aaKnown RBP3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CPDO75976 1380 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 USP17L8P0C7I0 530 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 UQCRFS1P1P0C7P4 283 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 TCF3P15923 654 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 FAM47CQ5HY64 1035 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 PPP4R3BQ5MIZ7 849 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 GOLGA6L1Q8N7Z2 621 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 FAM212AQ96EL1 285 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 KDM4CQ9H3R0 1056 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.47□□□□□ -1.852e-6■■■■■ 27.4
NEDD4-208ENST00000508342 ZBTB1Q9Y2K1 713 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 MROH5Q6ZUA9 1318 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 CNTNAP4Q9C0A0 1308 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 TOGARAM1Q9Y4F4 1720 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 EVI5O60447 810 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 ZBTB33Q86T24 672 aa3.47□□□□□ -1.85
NEDD4-208ENST00000508342 C1orf115Q9H7X2 142 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms