RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 DOT1LQ8TEK3 1739 aa17.08■□□□□ 0.32
DDX41-208ENST00000507955 NWD2Q9ULI1 1742 aa17.08■□□□□ 0.32
DDX41-208ENST00000507955 KDM4AO75164 1064 aa17.08■□□□□ 0.32
DDX41-208ENST00000507955 APPP05067 770 aa17.08■□□□□ 0.32
DDX41-208ENST00000507955 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.32
DDX41-208ENST00000507955 DACT1Q9NYF0 836 aa17.08■□□□□ 0.32
DDX41-208ENST00000507955 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
DDX41-208ENST00000507955 PTF1AQ7RTS3 328 aa17.07■□□□□ 0.32
DDX41-208ENST00000507955 IQSEC3Q9UPP2 1182 aaPredicted RBP17.07■□□□□ 0.32
DDX41-208ENST00000507955 ZNF532Q9HCE3 1301 aa17.07■□□□□ 0.32
DDX41-208ENST00000507955 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
DDX41-208ENST00000507955 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
DDX41-208ENST00000507955 ZNF830Q96NB3 372 aaPredicted RBP17.07■□□□□ 0.32
DDX41-208ENST00000507955 FUCA2Q9BTY2 467 aa17.07■□□□□ 0.32
DDX41-208ENST00000507955 AGXT2Q9BYV1 514 aa17.07■□□□□ 0.32
DDX41-208ENST00000507955 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
DDX41-208ENST00000507955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
DDX41-208ENST00000507955 GOLGA6L4A6NEF3 574 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 ANTXR2P58335 489 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 STK11IPQ8N1F8 1099 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 PRC1O43663 620 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 NR1I2O75469 434 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
DDX41-208ENST00000507955 RXRAP19793 462 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 ADD2P35612 726 aa17.06■□□□□ 0.32
DDX41-208ENST00000507955 NIP7Q9Y221 180 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX41-208ENST00000507955 ZNF213O14771 459 aa17.05■□□□□ 0.32
DDX41-208ENST00000507955 AP5Z1O43299 807 aa17.05■□□□□ 0.32
DDX41-208ENST00000507955 ZFYP08048 801 aaPredicted RBP17.05■□□□□ 0.32
DDX41-208ENST00000507955 MCM5P33992 734 aa17.05■□□□□ 0.32
DDX41-208ENST00000507955 RBM10P98175 930 aaKnown RBP17.05■□□□□ 0.32
DDX41-208ENST00000507955 CAMTA2O94983 1202 aa17.05■□□□□ 0.32
DDX41-208ENST00000507955 TERF1P54274 439 aa17.05■□□□□ 0.32
DDX41-208ENST00000507955 SENP2Q9HC62 589 aa17.05■□□□□ 0.32
DDX41-208ENST00000507955 KLF18A0A0U1RQI7 1052 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 BCAMP50895 628 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 TBC1D10CQ8IV04 446 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 SCAND2PQ9GZW5 306 aaPredicted RBP17.04■□□□□ 0.32
DDX41-208ENST00000507955 EP400Q96L91 3159 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 MYH14Q7Z406 1995 aaKnown RBP17.04■□□□□ 0.32
DDX41-208ENST00000507955 PDE6AP16499 860 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
DDX41-208ENST00000507955 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 MB21D2Q8IYB1 491 aaPredicted RBP17.04■□□□□ 0.32
DDX41-208ENST00000507955 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
DDX41-208ENST00000507955 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
DDX41-208ENST00000507955 GOLGB1Q14789 3259 aaKnown RBP17.04■□□□□ 0.32
DDX41-208ENST00000507955 MYH3P11055 1940 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
DDX41-208ENST00000507955 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
DDX41-208ENST00000507955 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
DDX41-208ENST00000507955 FAM182BQ5T319 152 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■■■□□ 17.2
DDX41-208ENST00000507955 CTNNA3Q9UI47 895 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 ADCY5O95622 1261 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
DDX41-208ENST00000507955 NUP62CLQ9H1M0 184 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 HPS5Q9UPZ3 1129 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 ELP1O95163 1332 aa17.03■□□□□ 0.32
DDX41-208ENST00000507955 FGFR2P21802 821 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 LRRFIP1Q32MZ4 808 aaKnown RBP17.02■□□□□ 0.32
DDX41-208ENST00000507955 C3orf67Q6ZVT6 689 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 CYB5R4Q7L1T6 521 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 CCDC144CPQ8IYA2 1237 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 LPIN2Q92539 896 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 USP28Q96RU2 1077 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 SALL1Q9NSC2 1324 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 A0A087WWV3 80 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 UQCRHLA0A096LP55 91 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.32
DDX41-208ENST00000507955 UQCRHP07919 91 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.32
DDX41-208ENST00000507955 CCDC24Q8N4L8 307 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 SPATA5Q8NB90 893 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 ZNF274Q96GC6 653 aaPredicted RBP17.02■□□□□ 0.32
DDX41-208ENST00000507955 LLPHQ9BRT6 129 aaKnown RBP17.02■□□□□ 0.32
DDX41-208ENST00000507955 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.32
DDX41-208ENST00000507955 COL4A1P02462 1669 aa17.02■□□□□ 0.31
DDX41-208ENST00000507955 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 TNMDQ9H2S6 317 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 CARMIL3Q8ND23 1372 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 B4E1Z4 1266 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 PRKAB2O43741 272 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
DDX41-208ENST00000507955 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
DDX41-208ENST00000507955 ARID4AP29374 1257 aaPredicted RBP17■□□□□ 0.31
DDX41-208ENST00000507955 CTDSPL2Q05D32 466 aa17■□□□□ 0.31
DDX41-208ENST00000507955 ERCC4Q92889 916 aaPredicted RBP17■□□□□ 0.31
DDX41-208ENST00000507955 AIFM3Q96NN9 605 aa17■□□□□ 0.31
DDX41-208ENST00000507955 MYL10Q9BUA6 226 aa17■□□□□ 0.31
DDX41-208ENST00000507955 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
DDX41-208ENST00000507955 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
DDX41-208ENST00000507955 NTSR2O95665 410 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms