RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SLC17A8Q8NDX2 589 aa17.92■□□□□ 0.46
DDR1-260ENST00000507533 OPTNQ96CV9 577 aa17.92■□□□□ 0.46
DDR1-260ENST00000507533 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
DDR1-260ENST00000507533 ELP3Q9H9T3 547 aa17.92■□□□□ 0.46
DDR1-260ENST00000507533 VEZTQ9HBM0 779 aa17.92■□□□□ 0.46
DDR1-260ENST00000507533 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
DDR1-260ENST00000507533 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
DDR1-260ENST00000507533 CFAP100Q494V2 611 aa17.91■□□□□ 0.46
DDR1-260ENST00000507533 CERS5Q8N5B7 392 aa17.91■□□□□ 0.46
DDR1-260ENST00000507533 ZFYVE28Q9HCC9 887 aa17.91■□□□□ 0.46
DDR1-260ENST00000507533 CD209Q9NNX6 404 aa17.91■□□□□ 0.46
DDR1-260ENST00000507533 RBM27Q9P2N5 1060 aaKnown RBP17.91■□□□□ 0.46
DDR1-260ENST00000507533 TRIOBPQ9H2D6 2365 aa17.9■□□□□ 0.46
DDR1-260ENST00000507533 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
DDR1-260ENST00000507533 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
DDR1-260ENST00000507533 TAF1CQ15572 869 aaPredicted RBP17.9■□□□□ 0.46
DDR1-260ENST00000507533 SH3TC2Q8TF17 1288 aa17.9■□□□□ 0.46
DDR1-260ENST00000507533 MS4A4AQ96JQ5 239 aa17.9■□□□□ 0.46
DDR1-260ENST00000507533 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
DDR1-260ENST00000507533 SPDYE2BA6NHP3 402 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 SPDYE6P0CI01 402 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 KCNJ4P48050 445 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 RASA3Q14644 834 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 BRI3BPQ8WY22 251 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 DPF3Q92784 378 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 RUNDC1Q96C34 613 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
DDR1-260ENST00000507533 CCL15-CCL14A0A0B4J2E2 113 aa17.88■□□□□ 0.45
DDR1-260ENST00000507533 IGKV5-2P06315 115 aa17.88■□□□□ 0.45
DDR1-260ENST00000507533 CCL15Q16663 113 aa17.88■□□□□ 0.45
DDR1-260ENST00000507533 LAMB1P07942 1786 aa17.87■□□□□ 0.45
DDR1-260ENST00000507533 MPHOSPH8Q99549 860 aa17.87■□□□□ 0.45
DDR1-260ENST00000507533 AOX1Q06278 1338 aa17.87■□□□□ 0.45
DDR1-260ENST00000507533 CEP290O15078 2479 aa17.87■□□□□ 0.45
DDR1-260ENST00000507533 ITGA6P23229 1130 aa17.86■□□□□ 0.45
DDR1-260ENST00000507533 GTF2A2P52657 109 aa17.86■□□□□ 0.45
DDR1-260ENST00000507533 RBM5P52756 815 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDR1-260ENST00000507533 KIF22Q14807 665 aa17.86■□□□□ 0.45
DDR1-260ENST00000507533 FAM43AQ8N2R8 423 aa17.86■□□□□ 0.45
DDR1-260ENST00000507533 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
DDR1-260ENST00000507533 ZNF853P0CG23 659 aa17.85■□□□□ 0.45
DDR1-260ENST00000507533 CHRNDQ07001 517 aa17.85■□□□□ 0.45
DDR1-260ENST00000507533 KSR2Q6VAB6 950 aa17.85■□□□□ 0.45
DDR1-260ENST00000507533 ARHGAP39Q9C0H5 1083 aa17.85■□□□□ 0.45
DDR1-260ENST00000507533 PI4KAP2A4QPH2 592 aa17.84■□□□□ 0.45
DDR1-260ENST00000507533 SNAP23O00161 211 aa17.84■□□□□ 0.45
DDR1-260ENST00000507533 WDHD1O75717 1129 aaPredicted RBP17.84■□□□□ 0.45
DDR1-260ENST00000507533 FKBP1AP62942 108 aaKnown RBP17.84■□□□□ 0.45
DDR1-260ENST00000507533 NEXNQ0ZGT2 675 aa17.84■□□□□ 0.45
DDR1-260ENST00000507533 CWF19L2Q2TBE0 894 aaKnown RBP17.84■□□□□ 0.45
DDR1-260ENST00000507533 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.84■□□□□ 0.45
DDR1-260ENST00000507533 UBE3BQ7Z3V4 1068 aa17.84■□□□□ 0.45
DDR1-260ENST00000507533 PI4KAP1Q8N8J0 262 aa17.84■□□□□ 0.45
DDR1-260ENST00000507533 SHISA4Q96DD7 197 aa17.84■□□□□ 0.45
DDR1-260ENST00000507533 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
DDR1-260ENST00000507533 IRS2Q9Y4H2 1338 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 RANBP2P49792 3224 aaKnown RBP17.83■□□□□ 0.44
DDR1-260ENST00000507533 H7C1W4 665 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 MAP3K9P80192 1104 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 TNFAIP1Q13829 316 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 RALBP1Q15311 655 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 CCDC30Q5VVM6 783 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 C8orf58Q8NAV2 365 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 JAG2Q9Y219 1238 aa17.83■□□□□ 0.44
DDR1-260ENST00000507533 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 TLR2O60603 784 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 TAF5LO75529 589 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 GNRH1P01148 92 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 IL1R1P14778 569 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 PRMT2P55345 433 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 LACTBP83111 547 aaPredicted RBP17.82■□□□□ 0.44
DDR1-260ENST00000507533 VGLL4Q14135 290 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 MTFR1Q15390 333 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 C15orf52Q6ZUT6 534 aaKnown RBP17.82■□□□□ 0.44
DDR1-260ENST00000507533 ZNF804AQ7Z570 1209 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
DDR1-260ENST00000507533 ZNF70Q9UC06 446 aaPredicted RBP17.82■□□□□ 0.44
DDR1-260ENST00000507533 GNAI1P63096 354 aa17.81■□□□□ 0.44
DDR1-260ENST00000507533 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDR1-260ENST00000507533 SPDYE2Q495Y8 402 aa17.81■□□□□ 0.44
DDR1-260ENST00000507533 CDAN1Q8IWY9 1227 aa17.81■□□□□ 0.44
DDR1-260ENST00000507533 HELBQ8NG08 1087 aaPredicted RBP17.81■□□□□ 0.44
DDR1-260ENST00000507533 NKX2-3Q8TAU0 364 aa17.81■□□□□ 0.44
DDR1-260ENST00000507533 HTATIP2Q9BUP3 242 aa17.81■□□□□ 0.44
DDR1-260ENST00000507533 CHMP4AQ9BY43 222 aa17.81■□□□□ 0.44
DDR1-260ENST00000507533 CSADQ9Y600 493 aa17.81■□□□□ 0.44
DDR1-260ENST00000507533 A0A0C4DFX4 3053 aa17.8■□□□□ 0.44
DDR1-260ENST00000507533 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
DDR1-260ENST00000507533 CSF1RP07333 972 aa17.8■□□□□ 0.44
DDR1-260ENST00000507533 TEPSINQ96N21 525 aa17.8■□□□□ 0.44
DDR1-260ENST00000507533 PLA2G12BQ9BX93 195 aa17.8■□□□□ 0.44
DDR1-260ENST00000507533 TDRD3Q9H7E2 651 aaKnown RBP17.8■□□□□ 0.44
DDR1-260ENST00000507533 NR2E3Q9Y5X4 410 aa17.8■□□□□ 0.44
DDR1-260ENST00000507533 CETPP11597 493 aa17.79■□□□□ 0.44
DDR1-260ENST00000507533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDR1-260ENST00000507533 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
DDR1-260ENST00000507533 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
DDR1-260ENST00000507533 ECM29Q5VYK3 1845 aa17.78■□□□□ 0.44
DDR1-260ENST00000507533 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms