RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 MTMR14Q8NCE2 650 aa10.37□□□□□ -0.75
PDGFC-205ENST00000506880 KLHDC4Q8TBB5 520 aa10.37□□□□□ -0.75
PDGFC-205ENST00000506880 C1orf115Q9H7X2 142 aa10.37□□□□□ -0.75
PDGFC-205ENST00000506880 HDAC9Q9UKV0 1011 aa10.37□□□□□ -0.75
PDGFC-205ENST00000506880 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
PDGFC-205ENST00000506880 AOX1Q06278 1338 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 TTC41PQ6P2S7 1318 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 H7C1D1 291 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 ERC2O15083 957 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 IFIT2P09913 472 aaKnown RBP10.36□□□□□ -0.75
PDGFC-205ENST00000506880 PRELPP51888 382 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 ZNF280AP59817 542 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-205ENST00000506880 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-205ENST00000506880 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 CCDC102BQ68D86 513 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 OLFM4Q6UX06 510 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 USP50Q70EL3 339 aaPredicted RBP10.36□□□□□ -0.75
PDGFC-205ENST00000506880 XAGE2Q96GT9 111 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 GMLQ99445 158 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
PDGFC-205ENST00000506880 COL4A5P29400 1685 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 YDJCA8MPS7 323 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
PDGFC-205ENST00000506880 DACT2Q5SW24 774 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 HELBQ8NG08 1087 aaPredicted RBP10.35□□□□□ -0.75
PDGFC-205ENST00000506880 EXOC6Q8TAG9 804 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
PDGFC-205ENST00000506880 PLSCR2Q9NRY7 297 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 ADARB2Q9NS39 739 aaKnown RBP10.35□□□□□ -0.75
PDGFC-205ENST00000506880 GPRC5DQ9NZD1 345 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 HACL1Q9UJ83 578 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 SERPINA10Q9UK55 444 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 EXOC6BQ9Y2D4 811 aa10.35□□□□□ -0.75
PDGFC-205ENST00000506880 COL1A1P02452 1464 aaPredicted RBP10.35□□□□□ -0.75
PDGFC-205ENST00000506880 PITPNM2Q9BZ72 1349 aa10.34□□□□□ -0.75
PDGFC-205ENST00000506880 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
PDGFC-205ENST00000506880 CENPQQ7L2Z9 268 aaPredicted RBP10.34□□□□□ -0.75
PDGFC-205ENST00000506880 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
PDGFC-205ENST00000506880 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
PDGFC-205ENST00000506880 MYH7P12883 1935 aa10.34□□□□□ -0.75
PDGFC-205ENST00000506880 MAST2Q6P0Q8 1798 aa10.34□□□□□ -0.75
PDGFC-205ENST00000506880 DOCK2Q92608 1830 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 PSMD14O00487 310 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 GLRX3O76003 335 aaKnown RBP10.33□□□□□ -0.76
PDGFC-205ENST00000506880 LDHCP07864 332 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 USP17L8P0C7I0 530 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 ATP5JP18859 108 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 GSTO1P78417 241 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 FSTL1Q12841 308 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 TTC39AQ5SRH9 613 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 FKBP1CQ5VVH2 108 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 HHIPL2Q6UWX4 724 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 AACSQ86V21 672 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 EAF2Q96CJ1 260 aaPredicted RBP10.33□□□□□ -0.76
PDGFC-205ENST00000506880 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 OSBPL3Q9H4L5 887 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 STAP2Q9UGK3 403 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 PGAP2Q9UHJ9 254 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 ZNF541Q9H0D2 1346 aa10.33□□□□□ -0.76
PDGFC-205ENST00000506880 ADAMTSL1Q8N6G6 1762 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 RFX7Q2KHR2 1363 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 GYG1P46976 350 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 BCAMP50895 628 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 SCNN1DP51172 638 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 TIMM10P62072 90 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 NUCB1Q02818 461 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 MFSD14BQ5SR56 506 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 LDHDQ86WU2 507 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 SPATA5Q8NB90 893 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
PDGFC-205ENST00000506880 ECHDC1Q9NTX5 307 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 DBNLQ9UJU6 430 aaKnown RBP10.32□□□□□ -0.76
PDGFC-205ENST00000506880 PPP2R3BQ9Y5P8 575 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 MYH2Q9UKX2 1941 aa10.32□□□□□ -0.76
PDGFC-205ENST00000506880 MYO1BO43795 1136 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 RAD17O75943 681 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 TOMM70O94826 608 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 LDHBP07195 334 aaKnown RBP10.31□□□□□ -0.76
PDGFC-205ENST00000506880 PLCG2P16885 1265 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 PHKA1P46020 1223 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 GTF2IP78347 998 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 TNFAIP1Q13829 316 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 ZSCAN25Q6NSZ9 544 aa10.31□□□□□ -0.76
PDGFC-205ENST00000506880 C16orf71Q8IYS4 520 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-205ENST00000506880 ZNF784Q8NCA9 323 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-205ENST00000506880 TAF1DQ9H5J8 278 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-205ENST00000506880 CNOT7Q9UIV1 285 aaKnown RBP10.31□□□□□ -0.76
PDGFC-205ENST00000506880 UNCXA6NJT0 531 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
PDGFC-205ENST00000506880 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
PDGFC-205ENST00000506880 DSG3P32926 999 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 EPHX2P34913 555 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
PDGFC-205ENST00000506880 MAP3K12Q12852 859 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 RASGRF1Q13972 1273 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 ERICH6Q7L0X2 663 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms