RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RSRC2Q7L4I2 434 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-211ENST00000506690 LINS1Q8NG48 757 aa19.79■□□□□ 0.76
SQSTM1-211ENST00000506690 UTP14AQ9BVJ6 771 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-211ENST00000506690 BIN1O00499 593 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 ZSCAN12O43309 604 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 ATP1A3P13637 1013 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 EXOC4Q96A65 974 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 FUT8Q9BYC5 575 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 CARMIL3Q8ND23 1372 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 CCT2P78371 535 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 PROSER3Q2NL68 480 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 MCMDC2Q4G0Z9 681 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 KCNG4Q8TDN1 519 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 ARFGAP3Q9NP61 516 aa19.78■□□□□ 0.76
SQSTM1-211ENST00000506690 MYO1CO00159 1063 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 CCDC191Q8NCU4 936 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 GOLGA5Q8TBA6 731 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 EFCC1Q9HA90 598 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 NCOA5Q9HCD5 579 aaKnown RBP19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 ZNF202O95125 648 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 YEATS4O95619 227 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 CHGBP05060 677 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 NLRP6P59044 892 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 TMEM139Q8IV31 216 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 USHBP1Q8N6Y0 703 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 FBXO18Q8NFZ0 1043 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 LTV1Q96GA3 475 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 CCDC34Q96HJ3 373 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 POLR3EQ9NVU0 708 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 CWC15Q9P013 229 aaKnown RBP19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 CLIC4Q9Y696 253 aa19.77■□□□□ 0.76
SQSTM1-211ENST00000506690 STK38Q15208 465 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 DPF2Q92785 391 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 AK7Q96M32 723 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 ATG3Q9NT62 314 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 MRFAP1Q9Y605 127 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 BTBD11A6QL63 1104 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 CBFA2T2O43439 604 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 FDPSP14324 419 aaKnown RBP19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 UBASH3AP57075 661 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 VSTM4Q8IW00 320 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 IQUBQ8NA54 791 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 KLHDC4Q8TBB5 520 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 RABGGTAQ92696 567 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 ZNF274Q96GC6 653 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 PARD6BQ9BYG5 372 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 LCMT1Q9UIC8 334 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 DBNLQ9UJU6 430 aaKnown RBP19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 ADAM21Q9UKJ8 722 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 PPP2R2CQ9Y2T4 447 aa19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 RGPD8O14715 1765 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-211ENST00000506690 ARHGAP6O43182 974 aa19.75■□□□□ 0.75
SQSTM1-211ENST00000506690 PDIA3P30101 505 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-211ENST00000506690 SF3A1Q15459 793 aaKnown RBP19.75■□□□□ 0.75
SQSTM1-211ENST00000506690 SPTLC2O15270 562 aa19.75■□□□□ 0.75
SQSTM1-211ENST00000506690 PPP2R3AQ06190 1150 aa19.75■□□□□ 0.75
SQSTM1-211ENST00000506690 RSPH14Q9UHP6 348 aa19.75■□□□□ 0.75
SQSTM1-211ENST00000506690 CASQ1P31415 396 aa19.74■□□□□ 0.75
SQSTM1-211ENST00000506690 WDR24Q96S15 920 aa19.74■□□□□ 0.75
SQSTM1-211ENST00000506690 USP54Q70EL1 1684 aa19.74■□□□□ 0.75
SQSTM1-211ENST00000506690 LMO7Q8WWI1 1683 aa19.74■□□□□ 0.75
SQSTM1-211ENST00000506690 GOLGA6L9A6NEM1 432 aa19.74■□□□□ 0.75
SQSTM1-211ENST00000506690 PPFIA3O75145 1194 aa19.74■□□□□ 0.75
SQSTM1-211ENST00000506690 TRIM66O15016 1216 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 SRLQ86TD4 932 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 CHMP4CQ96CF2 233 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 TUBE1Q9UJT0 475 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 NDUFB9Q9Y6M9 179 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 SH3TC1Q8TE82 1336 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 HEG1Q9ULI3 1381 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 MAP2K7O14733 419 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 CMA1P23946 247 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 TEFQ10587 303 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 AXDND1Q5T1B0 1012 aaPredicted RBP19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 JAKMIP3Q5VZ66 844 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 KIFC2Q96AC6 838 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 RBM33Q96EV2 1170 aaKnown RBP19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 ANKARQ7Z5J8 1434 aa19.73■□□□□ 0.75
SQSTM1-211ENST00000506690 CCDC151A5D8V7 595 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 H3BQF6 201 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 SERPINC1P01008 464 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 GYS2P54840 703 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 MYL5Q02045 173 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 CFAP100Q494V2 611 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 C10orf67Q8IYJ2 551 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 TOP1P11387 765 aaKnown RBP19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 PFKFB1P16118 471 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 ACTN2P35609 894 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 TNNT3P45378 269 aaPredicted RBP19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 NOP2P46087 812 aaKnown RBP19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 GNG11P61952 73 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 GOLGA8FQ08AF8 430 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 GOLGA8DPQ0D2H9 430 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 LONRF2Q1L5Z9 754 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 TNNI3KQ59H18 835 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 FAM177A1Q8N128 213 aaPredicted RBP19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 HAUS7Q99871 368 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 FPGT-TNNI3KV9GXZ4 949 aa19.72■□□□□ 0.75
SQSTM1-211ENST00000506690 MYO1BO43795 1136 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 GNL2Q13823 731 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms