RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 C20orf204Q6ZNR8 217 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 WFDC8Q8IUA0 241 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 CEP44Q9C0F1 390 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 LACRTQ9GZZ8 138 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 STARD13Q9Y3M8 1113 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 SPDYE3A6NKU9 549 aa12.05□□□□□ -0.48
RETREG1-203ENST00000506441 ITPKAP23677 461 aa12.05□□□□□ -0.48
RETREG1-203ENST00000506441 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
RETREG1-203ENST00000506441 IL22RA1Q8N6P7 574 aa12.05□□□□□ -0.48
RETREG1-203ENST00000506441 ABCB6Q9NP58 842 aa12.05□□□□□ -0.48
RETREG1-203ENST00000506441 PPME1Q9Y570 386 aa12.05□□□□□ -0.48
RETREG1-203ENST00000506441 SHISA8B8ZZ34 492 aa12.04□□□□□ -0.48
RETREG1-203ENST00000506441 ZNF385CQ66K41 422 aaPredicted RBP12.04□□□□□ -0.48
RETREG1-203ENST00000506441 GLIS3Q8NEA6 775 aa12.04□□□□□ -0.48
RETREG1-203ENST00000506441 BACH2Q9BYV9 841 aa12.04□□□□□ -0.48
RETREG1-203ENST00000506441 CLEC4MQ9H2X3 399 aaPredicted RBP12.04□□□□□ -0.48
RETREG1-203ENST00000506441 RNF19AQ9NV58 838 aa12.04□□□□□ -0.48
RETREG1-203ENST00000506441 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
RETREG1-203ENST00000506441 TRIM33Q9UPN9 1127 aa12.04□□□□□ -0.48
RETREG1-203ENST00000506441 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
RETREG1-203ENST00000506441 SCAMP3O14828 347 aaKnown RBP12.03□□□□□ -0.48
RETREG1-203ENST00000506441 GRIA4P48058 902 aa12.03□□□□□ -0.48
RETREG1-203ENST00000506441 AFF1P51825 1210 aaKnown RBP12.03□□□□□ -0.48
RETREG1-203ENST00000506441 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
RETREG1-203ENST00000506441 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
RETREG1-203ENST00000506441 KIAA1522Q9P206 1035 aaPredicted RBP12.03□□□□□ -0.48
RETREG1-203ENST00000506441 ST13P50502 369 aaKnown RBP12.02□□□□□ -0.49
RETREG1-203ENST00000506441 SPRED3Q2MJR0 410 aa12.02□□□□□ -0.49
RETREG1-203ENST00000506441 MAP4K3Q8IVH8 894 aa12.02□□□□□ -0.49
RETREG1-203ENST00000506441 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.49
RETREG1-203ENST00000506441 HHIPQ96QV1 700 aa12.02□□□□□ -0.49
RETREG1-203ENST00000506441 SRA1Q9HD15 236 aaKnown RBP12.02□□□□□ -0.49
RETREG1-203ENST00000506441 RLBP1P12271 317 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 IKBKEQ14164 716 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 LCE2AQ5TA79 106 aaPredicted RBP12.01□□□□□ -0.49
RETREG1-203ENST00000506441 LCE2CQ5TA81 110 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 ZSCAN1Q8NBB4 408 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 WHAMMQ8TF30 809 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 WNT8BQ93098 351 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 METTL5Q9NRN9 209 aaKnown RBP12.01□□□□□ -0.49
RETREG1-203ENST00000506441 MKL2Q9ULH7 1088 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 SAMM50Q9Y512 469 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
RETREG1-203ENST00000506441 WIZO95785 1651 aa12□□□□□ -0.49
RETREG1-203ENST00000506441 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
RETREG1-203ENST00000506441 SOX13Q9UN79 622 aa12□□□□□ -0.49
RETREG1-203ENST00000506441 FAM181BA6NEQ2 426 aa11.99□□□□□ -0.49
RETREG1-203ENST00000506441 METTL12A8MUP2 240 aa11.99□□□□□ -0.49
RETREG1-203ENST00000506441 H3BRJ5 948 aa11.99□□□□□ -0.49
RETREG1-203ENST00000506441 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
RETREG1-203ENST00000506441 PCDH1Q08174 1060 aa11.99□□□□□ -0.49
RETREG1-203ENST00000506441 TOP2AP11388 1531 aaKnown RBP11.99□□□□□ -0.49
RETREG1-203ENST00000506441 PIP4K2BP78356 416 aa11.98□□□□□ -0.49
RETREG1-203ENST00000506441 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
RETREG1-203ENST00000506441 SV2BQ7L1I2 683 aa11.98□□□□□ -0.49
RETREG1-203ENST00000506441 DTWD1Q8N5C7 304 aa11.98□□□□□ -0.49
RETREG1-203ENST00000506441 BEND7Q8N7W2 519 aaPredicted RBP11.98□□□□□ -0.49
RETREG1-203ENST00000506441 ZNF576Q9H609 170 aa11.98□□□□□ -0.49
RETREG1-203ENST00000506441 GPN3Q9UHW5 284 aaPredicted RBP11.98□□□□□ -0.49
RETREG1-203ENST00000506441 RAC1P63000 192 aa11.97□□□□□ -0.49
RETREG1-203ENST00000506441 GRIK5Q16478 980 aa11.97□□□□□ -0.49
RETREG1-203ENST00000506441 C3orf58Q8NDZ4 430 aa11.97□□□□□ -0.49
RETREG1-203ENST00000506441 RNF34Q969K3 372 aa11.97□□□□□ -0.49
RETREG1-203ENST00000506441 NOC4LQ9BVI4 516 aaKnown RBP11.97□□□□□ -0.49
RETREG1-203ENST00000506441 OSGEPQ9NPF4 335 aa11.97□□□□□ -0.49
RETREG1-203ENST00000506441 SH2B1Q9NRF2 756 aaPredicted RBP11.97□□□□□ -0.49
RETREG1-203ENST00000506441 TMEM39AQ9NV64 488 aa11.97□□□□□ -0.49
RETREG1-203ENST00000506441 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
RETREG1-203ENST00000506441 GNB5O14775 395 aa11.96□□□□□ -0.49
RETREG1-203ENST00000506441 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
RETREG1-203ENST00000506441 TCF3P15923 654 aa11.96□□□□□ -0.49
RETREG1-203ENST00000506441 ZNF76P36508 570 aa11.96□□□□□ -0.49
RETREG1-203ENST00000506441 DGKGP49619 791 aa11.96□□□□□ -0.49
RETREG1-203ENST00000506441 PWP1Q13610 501 aa11.96□□□□□ -0.49
RETREG1-203ENST00000506441 CCDC85BQ15834 202 aaPredicted RBP11.96□□□□□ -0.49
RETREG1-203ENST00000506441 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.49
RETREG1-203ENST00000506441 RECKO95980 971 aa11.95□□□□□ -0.5
RETREG1-203ENST00000506441 CTSHP09668 335 aa11.95□□□□□ -0.5
RETREG1-203ENST00000506441 C8orf86Q6ZUL3 223 aa11.95□□□□□ -0.5
RETREG1-203ENST00000506441 HS2ST1Q7LGA3 356 aa11.95□□□□□ -0.5
RETREG1-203ENST00000506441 DMRTC2Q8IXT2 367 aaPredicted RBP11.95□□□□□ -0.5
RETREG1-203ENST00000506441 KLHL23Q8NBE8 558 aa11.95□□□□□ -0.5
RETREG1-203ENST00000506441 SOX17Q9H6I2 414 aaPredicted RBP11.95□□□□□ -0.5
RETREG1-203ENST00000506441 LINC01387J3KSC0 135 aa11.94□□□□□ -0.5
RETREG1-203ENST00000506441 C19orf57Q0VDD7 668 aa11.94□□□□□ -0.5
RETREG1-203ENST00000506441 VN1R5Q7Z5H4 357 aa11.94□□□□□ -0.5
RETREG1-203ENST00000506441 SEC31BQ9NQW1 1179 aa11.94□□□□□ -0.5
RETREG1-203ENST00000506441 ERCC6Q03468 1493 aa11.94□□□□□ -0.5
RETREG1-203ENST00000506441 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
RETREG1-203ENST00000506441 NID1P14543 1247 aa11.93□□□□□ -0.5
RETREG1-203ENST00000506441 LMNB1P20700 586 aa11.93□□□□□ -0.5
RETREG1-203ENST00000506441 EPHA1P21709 976 aa11.93□□□□□ -0.5
RETREG1-203ENST00000506441 CDC25BP30305 580 aa11.93□□□□□ -0.5
RETREG1-203ENST00000506441 TRIM28Q13263 835 aaKnown RBP11.93□□□□□ -0.5
RETREG1-203ENST00000506441 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
RETREG1-203ENST00000506441 RELL1Q8IUW5 271 aa11.93□□□□□ -0.5
RETREG1-203ENST00000506441 SCARF2Q96GP6 870 aaPredicted RBP11.93□□□□□ -0.5
RETREG1-203ENST00000506441 FSCN2O14926 492 aa11.92□□□□□ -0.5
RETREG1-203ENST00000506441 B3GALT4O96024 378 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms