RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
PRDM5-207ENST00000505484 EAF2Q96CJ1 260 aaPredicted RBP18.4■□□□□ 0.54
PRDM5-207ENST00000505484 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
PRDM5-207ENST00000505484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.39■□□□□ 0.53
PRDM5-207ENST00000505484 MAP2K7O14733 419 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 MYO1BO43795 1136 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 RPS6KA5O75582 802 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 HMGB1P09429 215 aaKnown RBP18.39■□□□□ 0.53
PRDM5-207ENST00000505484 PARD6BQ9BYG5 372 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 MRFAP1Q9Y605 127 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 ARHGAP6O43182 974 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 LMAN1P49257 510 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 USHBP1Q8N6Y0 703 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 ERCC4Q92889 916 aaPredicted RBP18.39■□□□□ 0.53
PRDM5-207ENST00000505484 CCDC34Q96HJ3 373 aa18.39■□□□□ 0.53
PRDM5-207ENST00000505484 PLEKHG2Q9H7P9 1386 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 PTPDC1A2A3K4 754 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 SLC3A2P08195 630 aaKnown RBP18.38■□□□□ 0.53
PRDM5-207ENST00000505484 PPP2R3AQ06190 1150 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 FBXW7Q969H0 707 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 GEMIN8Q9NWZ8 242 aaKnown RBP18.38■□□□□ 0.53
PRDM5-207ENST00000505484 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
PRDM5-207ENST00000505484 NEDD4P46934 1319 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 VWA3AA6NCI4 1184 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 SASH1O94885 1247 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 NDUFA8P51970 172 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 LEKR1Q6ZMV7 388 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 GOLGA1Q92805 767 aa18.38■□□□□ 0.53
PRDM5-207ENST00000505484 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 G3BP1Q13283 466 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRDM5-207ENST00000505484 ICE2Q659A1 982 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 CADPS2Q86UW7 1296 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 KCNG4Q8TDN1 519 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 HNRNPLLQ8WVV9 542 aaKnown RBP18.37■□□□□ 0.53
PRDM5-207ENST00000505484 UTP14AQ9BVJ6 771 aaKnown RBP18.37■□□□□ 0.53
PRDM5-207ENST00000505484 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 BRMS1Q9HCU9 246 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 SALL1Q9NSC2 1324 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 TXLNAP40222 546 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 LONRF2Q1L5Z9 754 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 ILDR1Q86SU0 546 aaPredicted RBP18.37■□□□□ 0.53
PRDM5-207ENST00000505484 C9orf78Q9NZ63 289 aaPredicted RBP18.37■□□□□ 0.53
PRDM5-207ENST00000505484 CHPF2Q9P2E5 772 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 PPP2R2CQ9Y2T4 447 aa18.37■□□□□ 0.53
PRDM5-207ENST00000505484 A0A1B0GVL5 298 aa18.36■□□□□ 0.53
PRDM5-207ENST00000505484 YEATS4O95619 227 aa18.36■□□□□ 0.53
PRDM5-207ENST00000505484 HOXC9P31274 260 aa18.36■□□□□ 0.53
PRDM5-207ENST00000505484 ZC3H6P61129 1189 aaKnown RBP18.36■□□□□ 0.53
PRDM5-207ENST00000505484 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
PRDM5-207ENST00000505484 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
PRDM5-207ENST00000505484 UBASH3AP57075 661 aa18.35■□□□□ 0.53
PRDM5-207ENST00000505484 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
PRDM5-207ENST00000505484 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
PRDM5-207ENST00000505484 VSTM4Q8IW00 320 aa18.35■□□□□ 0.53
PRDM5-207ENST00000505484 LINC00301Q8NCQ3 95 aa18.35■□□□□ 0.53
PRDM5-207ENST00000505484 CCDC8Q9H0W5 538 aaPredicted RBP18.35■□□□□ 0.53
PRDM5-207ENST00000505484 MAGEA9P43362 315 aa18.35■□□□□ 0.53
PRDM5-207ENST00000505484 GNL2Q13823 731 aaKnown RBP18.35■□□□□ 0.53
PRDM5-207ENST00000505484 AGXT2Q9BYV1 514 aa18.35■□□□□ 0.53
PRDM5-207ENST00000505484 H3BQF6 201 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 GCP02774 474 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
PRDM5-207ENST00000505484 GTF2A1P52655 376 aaPredicted RBP18.34■□□□□ 0.53
PRDM5-207ENST00000505484 DHX32Q7L7V1 743 aaKnown RBP18.34■□□□□ 0.53
PRDM5-207ENST00000505484 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 HSD3B7Q9H2F3 369 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 EPC1Q9H2F5 836 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 GNG11P61952 73 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 TMEM139Q8IV31 216 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 SLAIN2Q9P270 581 aa18.34■□□□□ 0.53
PRDM5-207ENST00000505484 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
PRDM5-207ENST00000505484 CYP21A2P08686 494 aa18.33■□□□□ 0.53
PRDM5-207ENST00000505484 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.53
PRDM5-207ENST00000505484 TUBB4BP68371 445 aa18.33■□□□□ 0.53
PRDM5-207ENST00000505484 APOBRQ0VD83 1088 aa18.33■□□□□ 0.53
PRDM5-207ENST00000505484 SF3A1Q15459 793 aaKnown RBP18.33■□□□□ 0.53
PRDM5-207ENST00000505484 RGS22Q8NE09 1264 aa18.33■□□□□ 0.53
PRDM5-207ENST00000505484 KIFC2Q96AC6 838 aa18.33■□□□□ 0.53
PRDM5-207ENST00000505484 COL15A1P39059 1388 aa18.33■□□□□ 0.52
PRDM5-207ENST00000505484 ZNF202O95125 648 aa18.33■□□□□ 0.52
PRDM5-207ENST00000505484 STK38Q15208 465 aa18.33■□□□□ 0.52
PRDM5-207ENST00000505484 WDR24Q96S15 920 aa18.33■□□□□ 0.52
PRDM5-207ENST00000505484 MKRN1Q9UHC7 482 aaKnown RBP18.33■□□□□ 0.52
PRDM5-207ENST00000505484 USP5P45974 858 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 MYL5Q02045 173 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
PRDM5-207ENST00000505484 TLR7Q9NYK1 1049 aaKnown RBP18.32■□□□□ 0.52
PRDM5-207ENST00000505484 AXIN2Q9Y2T1 843 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 UTYO14607 1347 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 STX10O60499 249 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 EIF3JO75822 258 aaKnown RBP18.32■□□□□ 0.52
PRDM5-207ENST00000505484 SERPINC1P01008 464 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 ATP1A3P13637 1013 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 HDXQ7Z353 690 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 MRC1P22897 1456 aa18.32■□□□□ 0.52
PRDM5-207ENST00000505484 MED1Q15648 1581 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms