RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
NFKB1-205ENST00000505458 SLC9C2Q5TAH2 1124 aa13.37□□□□□ -0.27
NFKB1-205ENST00000505458 MTA3Q9BTC8 594 aa13.37□□□□□ -0.27
NFKB1-205ENST00000505458 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
NFKB1-205ENST00000505458 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-205ENST00000505458 FAM184AQ8NB25 1140 aa13.37□□□□□ -0.27
NFKB1-205ENST00000505458 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
NFKB1-205ENST00000505458 ANKRD2Q9GZV1 360 aa13.37□□□□□ -0.27
NFKB1-205ENST00000505458 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-205ENST00000505458 ONECUT3O60422 494 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-205ENST00000505458 PDE6AP16499 860 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 CASZ1Q86V15 1759 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 KCNQ2O43526 872 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-205ENST00000505458 PHKA1P46020 1223 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 ST3GAL1Q11201 340 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 SCARF1Q14162 830 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 GPT2Q8TD30 523 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 BRF1Q92994 677 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-205ENST00000505458 LRSAM1Q6UWE0 723 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 GJD4Q96KN9 370 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-205ENST00000505458 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-205ENST00000505458 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
NFKB1-205ENST00000505458 STOX1Q6ZVD7 989 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 ZNF804BA4D1E1 1349 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 IDH1O75874 414 aaKnown RBP13.35□□□□□ -0.27
NFKB1-205ENST00000505458 NT5C2P49902 561 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 NECAB1Q8N987 351 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 CAVIN4Q5BKX8 364 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 CCDC183Q5T5S1 534 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-205ENST00000505458 USP48Q86UV5 1035 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-205ENST00000505458 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
NFKB1-205ENST00000505458 C4BP0C0L5 1744 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 FGAP02671 866 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 CHRNDQ07001 517 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 ZNF532Q9HCE3 1301 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 DUOX1Q9NRD9 1551 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 H3BQV1 296 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
NFKB1-205ENST00000505458 TCHHQ07283 1943 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-205ENST00000505458 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
NFKB1-205ENST00000505458 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
NFKB1-205ENST00000505458 CDKL5O76039 1030 aa13.33□□□□□ -0.28
NFKB1-205ENST00000505458 RASGRF1Q13972 1273 aa13.33□□□□□ -0.28
NFKB1-205ENST00000505458 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
NFKB1-205ENST00000505458 PUS7LQ9H0K6 701 aaKnown RBP13.33□□□□□ -0.28
NFKB1-205ENST00000505458 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.28
NFKB1-205ENST00000505458 CHD4Q14839 1912 aa13.33□□□□□ -0.28
NFKB1-205ENST00000505458 PATL2C9JE40 543 aaKnown RBP13.33□□□□□ -0.28
NFKB1-205ENST00000505458 NASPP49321 788 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-205ENST00000505458 CPLX2Q6PUV4 134 aaKnown RBP13.33□□□□□ -0.28
NFKB1-205ENST00000505458 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-205ENST00000505458 SEC31BQ9NQW1 1179 aa13.33□□□□□ -0.28
NFKB1-205ENST00000505458 ERFEQ4G0M1 354 aa13.32□□□□□ -0.28
NFKB1-205ENST00000505458 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-205ENST00000505458 MAST2Q6P0Q8 1798 aa13.32□□□□□ -0.28
NFKB1-205ENST00000505458 GNPATO15228 680 aa13.32□□□□□ -0.28
NFKB1-205ENST00000505458 PRC1O43663 620 aa13.32□□□□□ -0.28
NFKB1-205ENST00000505458 STRBPQ96SI9 672 aaKnown RBP13.32□□□□□ -0.28
NFKB1-205ENST00000505458 KRT23Q9C075 422 aa13.32□□□□□ -0.28
NFKB1-205ENST00000505458 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-205ENST00000505458 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
NFKB1-205ENST00000505458 PCP11498 1178 aaKnown RBP13.31□□□□□ -0.28
NFKB1-205ENST00000505458 RCAN1P53805 252 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 NSUN7Q8NE18 718 aaKnown RBP13.31□□□□□ -0.28
NFKB1-205ENST00000505458 TCEANC2Q96MN5 208 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 LARP6Q9BRS8 491 aaKnown RBP13.31□□□□□ -0.28
NFKB1-205ENST00000505458 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 FAM177BA6PVY3 158 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 SCRN1Q12765 414 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 FAM43AQ8N2R8 423 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 ZNF396Q96N95 335 aaPredicted RBP13.31□□□□□ -0.28
NFKB1-205ENST00000505458 NAPBQ9H115 298 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 TSPY26PQ9H489 355 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 TMEM63CQ9P1W3 806 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 MYH13Q9UKX3 1938 aa13.31□□□□□ -0.28
NFKB1-205ENST00000505458 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
NFKB1-205ENST00000505458 AFF2P51816 1311 aa13.3□□□□□ -0.28
NFKB1-205ENST00000505458 SALL1Q9NSC2 1324 aa13.3□□□□□ -0.28
NFKB1-205ENST00000505458 FOXP2O15409 715 aa13.3□□□□□ -0.28
NFKB1-205ENST00000505458 STK3Q13188 491 aa13.3□□□□□ -0.28
NFKB1-205ENST00000505458 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
NFKB1-205ENST00000505458 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
NFKB1-205ENST00000505458 UVSSAQ2YD98 709 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms