RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
UBE3D-206ENST00000505226 KIF28PB7ZC32 967 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
UBE3D-206ENST00000505226 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 HSD3B7Q9H2F3 369 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 ARFGEF2Q9Y6D5 1785 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 HAND2P61296 217 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 ISM2Q6H9L7 571 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 TMC6Q7Z403 805 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 FER1L4A9Z1Z3 1794 aa13.85□□□□□ -0.19
UBE3D-206ENST00000505226 A0A1W2PQ27 194 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 A0A1W2PQ64 194 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 A0A1W2PQD8 194 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 EVCP57679 992 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 ZNF771Q7L3S4 317 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-206ENST00000505226 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 SMC2O95347 1197 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 SLU7O95391 586 aaKnown RBP13.84□□□□□ -0.19
UBE3D-206ENST00000505226 ERCC6LQ2NKX8 1250 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 SYT10Q6XYQ8 523 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 MEGF6O75095 1541 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 NWD2Q9ULI1 1742 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 H7C1W4 665 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 FANCGO15287 622 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 RNF113AO15541 343 aaKnown RBP13.84□□□□□ -0.19
UBE3D-206ENST00000505226 GSDMDP57764 484 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 GABPB1Q06547 395 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-206ENST00000505226 TERF2Q15554 542 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 AXDND1Q5T1B0 1012 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-206ENST00000505226 PUS3Q9BZE2 481 aaKnown RBP13.84□□□□□ -0.19
UBE3D-206ENST00000505226 NAT10Q9H0A0 1025 aaKnown RBP13.84□□□□□ -0.19
UBE3D-206ENST00000505226 L2HGDHQ9H9P8 463 aa13.84□□□□□ -0.19
UBE3D-206ENST00000505226 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 CYP27B1O15528 508 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 ATP1A3P13637 1013 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 NBPF14Q5TI25 921 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
UBE3D-206ENST00000505226 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 WDHD1O75717 1129 aaPredicted RBP13.83□□□□□ -0.2
UBE3D-206ENST00000505226 ZNF202O95125 648 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 STK38Q15208 465 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 IMPACTQ9P2X3 320 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 MROH7-TTC4A0A0A0MT08 1334 aa13.83□□□□□ -0.2
UBE3D-206ENST00000505226 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 KRT222Q8N1A0 295 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 FBXO18Q8NFZ0 1043 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 PLBD2Q8NHP8 589 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 BPIFA3Q9BQP9 254 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 DENND2AQ9ULE3 1009 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 SPTLC2O15270 562 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
UBE3D-206ENST00000505226 ANTXR2P58335 489 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 MYSM1Q5VVJ2 828 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 POLR3EQ9NVU0 708 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 A0A1B0GUL7 405 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 LMOD1P29536 600 aaPredicted RBP13.82□□□□□ -0.2
UBE3D-206ENST00000505226 FBXL16Q8N461 479 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 DPF2Q92785 391 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
UBE3D-206ENST00000505226 SLC3A2P08195 630 aaKnown RBP13.81□□□□□ -0.2
UBE3D-206ENST00000505226 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
UBE3D-206ENST00000505226 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 H2AFXP16104 143 aaPredicted RBP13.81□□□□□ -0.2
UBE3D-206ENST00000505226 PFKFB1P16118 471 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 NLRP12P59046 1061 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 GOLGA8FQ08AF8 430 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 GOLGA8DPQ0D2H9 430 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 KRT28Q7Z3Y7 464 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 ORC3Q9UBD5 711 aaPredicted RBP13.81□□□□□ -0.2
UBE3D-206ENST00000505226 KLF18A0A0U1RQI7 1052 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 FGAP02671 866 aa13.81□□□□□ -0.2
UBE3D-206ENST00000505226 MARCKSP29966 332 aaPredicted RBP13.81□□□□□ -0.2
UBE3D-206ENST00000505226 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE3D-206ENST00000505226 GLI3P10071 1580 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 YEATS4O95619 227 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
UBE3D-206ENST00000505226 ADORA1P30542 326 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 SCARF1Q14162 830 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 MB21D2Q8IYB1 491 aaPredicted RBP13.8□□□□□ -0.2
UBE3D-206ENST00000505226 KCNG4Q8TDN1 519 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 GPR108Q9NPR9 543 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
UBE3D-206ENST00000505226 PRC1O43663 620 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
UBE3D-206ENST00000505226 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
UBE3D-206ENST00000505226 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 EYA2O00167 538 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 TATP17735 454 aaPredicted RBP13.79□□□□□ -0.2
UBE3D-206ENST00000505226 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
UBE3D-206ENST00000505226 FANCCQ00597 558 aa13.79□□□□□ -0.2
UBE3D-206ENST00000505226 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
UBE3D-206ENST00000505226 ANO1Q5XXA6 986 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms