RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 C1orf141Q5JVX7 400 aa6.56□□□□□ -1.36
CDH9-203ENST00000505045 NFATC2IPQ8NCF5 419 aa6.56□□□□□ -1.36
CDH9-203ENST00000505045 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
CDH9-203ENST00000505045 YBX3P16989 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDH9-203ENST00000505045 POLD1P28340 1107 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 CABP4P57796 275 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 WWC3Q9ULE0 1092 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 AFDNP55196 1824 aaKnown RBP6.55□□□□□ -1.36
CDH9-203ENST00000505045 SCN7AQ01118 1682 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 K7ELQ4 463 aaPredicted RBP6.55□□□□□ -1.36
CDH9-203ENST00000505045 U2SURPO15042 1029 aaKnown RBP6.55□□□□□ -1.36
CDH9-203ENST00000505045 HSP90AB1P08238 724 aaKnown RBP6.55□□□□□ -1.36
CDH9-203ENST00000505045 SSFA2P28290 1259 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 SLC39A6Q13433 755 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 AKAP4Q5JQC9 854 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 SPOCK3Q9BQ16 436 aa6.55□□□□□ -1.36
CDH9-203ENST00000505045 CNTNAP4Q9C0A0 1308 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 PXDNLA1KZ92 1463 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 SOBPA7XYQ1 873 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 PPP2R1AP30153 589 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 DHX9Q08211 1270 aaKnown RBP6.54□□□□□ -1.36
CDH9-203ENST00000505045 CBLBQ13191 982 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 PHACTR3Q96KR7 559 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 SLC52A2Q9HAB3 445 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 PGPEP1Q9NXJ5 209 aa6.54□□□□□ -1.36
CDH9-203ENST00000505045 RNMTO43148 476 aaKnown RBP6.53□□□□□ -1.36
CDH9-203ENST00000505045 CRKLP46109 303 aaKnown RBP6.53□□□□□ -1.36
CDH9-203ENST00000505045 C6orf118Q5T5N4 469 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 C10orf71Q711Q0 1435 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 MTMR14Q8NCE2 650 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 BCORQ6W2J9 1755 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 NRXN2Q9P2S2 1712 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 ZBBXA8MT70 800 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 PRKAR2BP31323 418 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 INTS5Q6P9B9 1019 aaKnown RBP6.53□□□□□ -1.36
CDH9-203ENST00000505045 DNAJC10Q8IXB1 793 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 FLAD1Q8NFF5 587 aa6.53□□□□□ -1.36
CDH9-203ENST00000505045 TSEN34Q9BSV6 310 aaKnown RBP6.53□□□□□ -1.36
CDH9-203ENST00000505045 SRP68Q9UHB9 627 aaKnown RBP6.53□□□□□ -1.36
CDH9-203ENST00000505045 KDM3BQ7LBC6 1761 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 CEMIPQ8WUJ3 1361 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 LAMB4A4D0S4 1761 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 DLEC1Q9Y238 1755 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 MMP10P09238 476 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 FBXO45P0C2W1 286 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 BMP2P12643 396 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 GYS1P13807 737 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 GPR162Q16538 588 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 NBPF20Q3BBV1 942 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 ZNF784Q8NCA9 323 aaPredicted RBP6.52□□□□□ -1.37
CDH9-203ENST00000505045 IL17REQ8NFR9 667 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 SNRKQ9NRH2 765 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 RTCBQ9Y3I0 505 aaKnown RBP6.52□□□□□ -1.37
CDH9-203ENST00000505045 ANKRD31Q8N7Z5 1873 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 PCNTO95613 3336 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 COL11A2P13942 1736 aaPredicted RBP6.52□□□□□ -1.37
CDH9-203ENST00000505045 ARFGEF1Q9Y6D6 1849 aa6.52□□□□□ -1.37
CDH9-203ENST00000505045 USP42Q9H9J4 1324 aaKnown RBP6.51□□□□□ -1.37
CDH9-203ENST00000505045 SPINT1O43278 529 aa6.51□□□□□ -1.37
CDH9-203ENST00000505045 LILRA1O75019 489 aa6.51□□□□□ -1.37
CDH9-203ENST00000505045 RPS6KA4O75676 772 aa6.51□□□□□ -1.37
CDH9-203ENST00000505045 DDR1Q08345 913 aa6.51□□□□□ -1.37
CDH9-203ENST00000505045 DZIP3Q86Y13 1208 aaKnown RBP6.51□□□□□ -1.37
CDH9-203ENST00000505045 TMPRSS4Q9NRS4 437 aa6.51□□□□□ -1.37
CDH9-203ENST00000505045 DNMT3LQ9UJW3 386 aa6.51□□□□□ -1.37
CDH9-203ENST00000505045 ZBTB1Q9Y2K1 713 aa6.51□□□□□ -1.37
CDH9-203ENST00000505045 SOS1Q07889 1333 aaPredicted RBP6.51□□□□□ -1.37
CDH9-203ENST00000505045 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 KCNQ3O43525 872 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 UPP2O95045 317 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 CYP19A1P11511 503 aaPredicted RBP6.5□□□□□ -1.37
CDH9-203ENST00000505045 PLA2G4EQ3MJ16 856 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 TRAPPC3LQ5T215 181 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 KDF1Q8NAX2 398 aaPredicted RBP6.5□□□□□ -1.37
CDH9-203ENST00000505045 CD2APQ9Y5K6 639 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 COL15A1P39059 1388 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 CACNA1SQ13698 1873 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 ADCY9O60503 1353 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 CARMIL3Q8ND23 1372 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 U2AF1L5P0DN76 240 aaPredicted RBP6.5□□□□□ -1.37
CDH9-203ENST00000505045 ADD1P35611 737 aaKnown RBP6.5□□□□□ -1.37
CDH9-203ENST00000505045 U2AF1Q01081 240 aaKnown RBP eCLIP6.5□□□□□ -1.37
CDH9-203ENST00000505045 DCTN1Q14203 1278 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 LCE1DQ5T752 114 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 MCM10Q7L590 875 aa6.5□□□□□ -1.37
CDH9-203ENST00000505045 ZNF496Q96IT1 587 aaPredicted RBP6.5□□□□□ -1.37
CDH9-203ENST00000505045 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
CDH9-203ENST00000505045 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
CDH9-203ENST00000505045 PRKCSHP14314 528 aaPredicted RBP6.49□□□□□ -1.37
CDH9-203ENST00000505045 RFC4P35249 363 aa6.49□□□□□ -1.37
CDH9-203ENST00000505045 NR1H3Q13133 447 aa6.49□□□□□ -1.37
CDH9-203ENST00000505045 GAS2L2Q8NHY3 880 aa6.49□□□□□ -1.37
CDH9-203ENST00000505045 CCDC87Q9NVE4 849 aa6.49□□□□□ -1.37
CDH9-203ENST00000505045 MAN1A2O60476 641 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 PIP4K2AP48426 406 aaPredicted RBP6.48□□□□□ -1.37
CDH9-203ENST00000505045 USPL1Q5W0Q7 1092 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 ZNF790Q6PG37 636 aa6.48□□□□□ -1.37
CDH9-203ENST00000505045 CFAP53Q96M91 514 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms