RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 UFL1O94874 794 aa14.33□□□□□ -0.12
POLR2J3-210ENST00000504677 ZNF589Q86UQ0 364 aaPredicted RBP14.33□□□□□ -0.12
POLR2J3-210ENST00000504677 DSCC1Q9BVC3 393 aa14.33□□□□□ -0.12
POLR2J3-210ENST00000504677 NSFL1CQ9UNZ2 370 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-210ENST00000504677 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
POLR2J3-210ENST00000504677 MAST3O60307 1309 aa14.33□□□□□ -0.12
POLR2J3-210ENST00000504677 COL1A1P02452 1464 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 MYO5AQ9Y4I1 1855 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 ST18O60284 1047 aa14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 FRAT2O75474 233 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 PDE6AP16499 860 aa14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 SLC9C2Q5TAH2 1124 aa14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 ZGPATQ8N5A5 531 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 UPF1Q92900 1129 aaKnown RBP eCLIP14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 KCNB2Q92953 911 aa14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 MTFR1LQ9H019 292 aa14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 KIAA1551Q9HCM1 1747 aa14.32□□□□□ -0.12
POLR2J3-210ENST00000504677 KLRK1P26718 216 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 POLD1P28340 1107 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 PTH1RQ03431 593 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 NECTIN1Q15223 517 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 CC2D2BQ6DHV5 1058 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 TBC1D16Q8TBP0 767 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 ZNF622Q969S3 477 aaKnown RBP eCLIP14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
POLR2J3-210ENST00000504677 CCDC88AQ3V6T2 1871 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 MCM2P49736 904 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 MPNDQ8N594 471 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 WDR66Q8TBY9 1149 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 OSBP2Q969R2 916 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 SEC62Q99442 399 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 TBC1D2Q9BYX2 928 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 ZNF532Q9HCE3 1301 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 SALL1Q9NSC2 1324 aa14.3□□□□□ -0.12
POLR2J3-210ENST00000504677 TCRBV5S4A2TA0A5A2 114 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 M0R2C6 588 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 KRT32Q14532 448 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 PRPF40BQ6NWY9 871 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 DPP8Q6V1X1 898 aaPredicted RBP14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 MAGEB6Q8N7X4 407 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 TDRD7Q8NHU6 1098 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 EYA3Q99504 573 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 TM6SF1Q9BZW5 370 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 WWC3Q9ULE0 1092 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 PALD1Q9ULE6 856 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 SNX14Q9Y5W7 946 aa14.29□□□□□ -0.12
POLR2J3-210ENST00000504677 WTIPA6NIX2 430 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 C6orf229H3BNL8 230 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 SLC27A2O14975 620 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 GPAA1O43292 621 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 IL1R1P14778 569 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 PSMA5P28066 241 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 CCDC129Q6ZRS4 1044 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 ERICH6Q7L0X2 663 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 TXNRD3Q86VQ6 643 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 SLX4Q8IY92 1834 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 RPAP1Q9BWH6 1393 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 RAI14Q9P0K7 980 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 ABCF2Q9UG63 623 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 POLLQ9UGP5 575 aa14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 IQSEC3Q9UPP2 1182 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-210ENST00000504677 ZMYM6O95789 1325 aa14.27□□□□□ -0.12
POLR2J3-210ENST00000504677 CHGBP05060 677 aa14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 HSPD1P10809 573 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 GNAT2P19087 354 aa14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 AIDAQ96BJ3 306 aa14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 COA1Q9GZY4 146 aa14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 PUS7LQ9H0K6 701 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 CD209Q9NNX6 404 aa14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 LAMA4Q16363 1823 aa14.27□□□□□ -0.13
POLR2J3-210ENST00000504677 K7ELQ4 463 aaPredicted RBP14.26□□□□□ -0.13
POLR2J3-210ENST00000504677 CHRNA5P30532 468 aa14.26□□□□□ -0.13
POLR2J3-210ENST00000504677 TGFB2P61812 414 aa14.26□□□□□ -0.13
POLR2J3-210ENST00000504677 CHAF1AQ13111 956 aaPredicted RBP14.26□□□□□ -0.13
POLR2J3-210ENST00000504677 SUPT20HQ8NEM7 779 aa14.26□□□□□ -0.13
POLR2J3-210ENST00000504677 TBC1D22AQ8WUA7 517 aa14.26□□□□□ -0.13
POLR2J3-210ENST00000504677 ZC3H12CQ9C0D7 883 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-210ENST00000504677 ZBTB7AO95365 584 aa14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 NEK4P51957 841 aa14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 GSTO1P78417 241 aa14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 R3HDM1Q15032 1099 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 SLFNL1Q499Z3 407 aa14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 SOGA3Q5TF21 947 aa14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 NAA16Q6N069 864 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 TTLL6Q8N841 843 aa14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-210ENST00000504677 FAM205AQ6ZU69 1335 aa14.24□□□□□ -0.13
POLR2J3-210ENST00000504677 MBD4O95243 580 aa14.24□□□□□ -0.13
POLR2J3-210ENST00000504677 CYP7A1P22680 504 aa14.24□□□□□ -0.13
POLR2J3-210ENST00000504677 IMMTQ16891 758 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-210ENST00000504677 VPS53Q5VIR6 699 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms