RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 TRPC5Q9UL62 973 aaPredicted RBP10.74□□□□□ -0.69
CASC9-201ENST00000504531 CAMTA1Q9Y6Y1 1673 aa10.73□□□□□ -0.69
CASC9-201ENST00000504531 GOLGA6L3A6NEY3 463 aa10.73□□□□□ -0.69
CASC9-201ENST00000504531 ERVH48-1M5A8F1 160 aa10.73□□□□□ -0.69
CASC9-201ENST00000504531 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
CASC9-201ENST00000504531 PLEKHO1Q53GL0 409 aaPredicted RBP10.73□□□□□ -0.69
CASC9-201ENST00000504531 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
CASC9-201ENST00000504531 LRRCC1Q9C099 1032 aa10.73□□□□□ -0.69
CASC9-201ENST00000504531 CEP126Q9P2H0 1117 aa10.73□□□□□ -0.69
CASC9-201ENST00000504531 COL16A1Q07092 1604 aaPredicted RBP10.73□□□□□ -0.69
CASC9-201ENST00000504531 KDM3BQ7LBC6 1761 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 FOXO3O43524 673 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 UPP2O95045 317 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 MTX1Q13505 466 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 KRT24Q2M2I5 525 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 MRPL14Q6P1L8 145 aaKnown RBP10.72□□□□□ -0.69
CASC9-201ENST00000504531 G2E3Q7L622 706 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 TNPO1Q92973 898 aaKnown RBP10.72□□□□□ -0.69
CASC9-201ENST00000504531 KIFC2Q96AC6 838 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 HEG1Q9ULI3 1381 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 LTN1O94822 1766 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 TUBGCP6Q96RT7 1819 aa10.72□□□□□ -0.69
CASC9-201ENST00000504531 CYP2E1P05181 493 aaPredicted RBP10.71□□□□□ -0.69
CASC9-201ENST00000504531 HSP90AA1P07900 732 aaKnown RBP10.71□□□□□ -0.69
CASC9-201ENST00000504531 MCCP23508 829 aa10.71□□□□□ -0.69
CASC9-201ENST00000504531 EIF4A1P60842 406 aaKnown RBP10.71□□□□□ -0.69
CASC9-201ENST00000504531 SCARF1Q14162 830 aa10.71□□□□□ -0.69
CASC9-201ENST00000504531 ZNF787Q6DD87 383 aa10.71□□□□□ -0.69
CASC9-201ENST00000504531 MEIOBQ8N635 442 aa10.71□□□□□ -0.69
CASC9-201ENST00000504531 INTS4Q96HW7 963 aaKnown RBP10.71□□□□□ -0.69
CASC9-201ENST00000504531 USP44Q9H0E7 712 aa10.71□□□□□ -0.69
CASC9-201ENST00000504531 USP42Q9H9J4 1324 aaKnown RBP10.71□□□□□ -0.69
CASC9-201ENST00000504531 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.69
CASC9-201ENST00000504531 KIF1AQ12756 1690 aa10.7□□□□□ -0.7
CASC9-201ENST00000504531 A6NJR5 290 aa10.7□□□□□ -0.7
CASC9-201ENST00000504531 ALDH1L1O75891 902 aa10.7□□□□□ -0.7
CASC9-201ENST00000504531 FKBP5Q13451 457 aaPredicted RBP10.7□□□□□ -0.7
CASC9-201ENST00000504531 Q6ZVU0 165 aa10.7□□□□□ -0.7
CASC9-201ENST00000504531 ARHGEF25Q86VW2 580 aa10.7□□□□□ -0.7
CASC9-201ENST00000504531 GMPR2Q9P2T1 348 aaKnown RBP10.7□□□□□ -0.7
CASC9-201ENST00000504531 UBTFL1P0CB47 393 aaPredicted RBP10.69□□□□□ -0.7
CASC9-201ENST00000504531 BMP1P13497 986 aa10.69□□□□□ -0.7
CASC9-201ENST00000504531 MX1P20591 662 aa10.69□□□□□ -0.7
CASC9-201ENST00000504531 KLHL40Q2TBA0 621 aa10.69□□□□□ -0.7
CASC9-201ENST00000504531 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
CASC9-201ENST00000504531 HDGFL1Q5TGJ6 251 aa10.69□□□□□ -0.7
CASC9-201ENST00000504531 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
CASC9-201ENST00000504531 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
CASC9-201ENST00000504531 ZNF784Q8NCA9 323 aaPredicted RBP10.69□□□□□ -0.7
CASC9-201ENST00000504531 TSEN34Q9BSV6 310 aaKnown RBP10.69□□□□□ -0.7
CASC9-201ENST00000504531 TMPRSS4Q9NRS4 437 aa10.69□□□□□ -0.7
CASC9-201ENST00000504531 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
CASC9-201ENST00000504531 PSME1Q06323 249 aa10.68□□□□□ -0.7
CASC9-201ENST00000504531 SF3B2Q13435 895 aaKnown RBP10.68□□□□□ -0.7
CASC9-201ENST00000504531 CUL4AQ13619 759 aa10.68□□□□□ -0.7
CASC9-201ENST00000504531 SLC4A10Q6U841 1118 aa10.68□□□□□ -0.7
CASC9-201ENST00000504531 TICAM2Q86XR7 235 aa10.68□□□□□ -0.7
CASC9-201ENST00000504531 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
CASC9-201ENST00000504531 ESYT1Q9BSJ8 1104 aa10.68□□□□□ -0.7
CASC9-201ENST00000504531 MIS18AQ9NYP9 233 aa10.68□□□□□ -0.7
CASC9-201ENST00000504531 DBF4Q9UBU7 674 aaPredicted RBP10.68□□□□□ -0.7
CASC9-201ENST00000504531 AHDC1Q5TGY3 1603 aaPredicted RBP10.68□□□□□ -0.7
CASC9-201ENST00000504531 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
CASC9-201ENST00000504531 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
CASC9-201ENST00000504531 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
CASC9-201ENST00000504531 TRIM47Q96LD4 638 aa10.67□□□□□ -0.7
CASC9-201ENST00000504531 PCDHB11Q9Y5F2 797 aa10.67□□□□□ -0.7
CASC9-201ENST00000504531 DCCP43146 1447 aa10.67□□□□□ -0.7
CASC9-201ENST00000504531 UTYO14607 1347 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 F6X3S4 739 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 XRCC6P12956 609 aaKnown RBP eCLIP10.66□□□□□ -0.7
CASC9-201ENST00000504531 CHMLP26374 656 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 ESCO1Q5FWF5 840 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 BEND3Q5T5X7 828 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 NBPF6Q5VWK0 638 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 ERC1Q8IUD2 1116 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 RNF135Q8IUD6 432 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
CASC9-201ENST00000504531 DNAAF4Q8WXU2 420 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 NBPF4Q96M43 638 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 HYPKQ9NX55 129 aa10.66□□□□□ -0.7
CASC9-201ENST00000504531 TRPM3Q9HCF6 1732 aaPredicted RBP10.66□□□□□ -0.7
CASC9-201ENST00000504531 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.7
CASC9-201ENST00000504531 LILRA1O75019 489 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 BAG4O95429 457 aaKnown RBP10.65□□□□□ -0.7
CASC9-201ENST00000504531 GCP02774 474 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 TEFQ10587 303 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 CBLBQ13191 982 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 CC2D2BQ6DHV5 1058 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.7
CASC9-201ENST00000504531 ALG2Q9H553 416 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 CYLDQ9NQC7 956 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 BRPF3Q9ULD4 1205 aa10.65□□□□□ -0.7
CASC9-201ENST00000504531 LRRFIP2Q9Y608 721 aaKnown RBP10.65□□□□□ -0.7
CASC9-201ENST00000504531 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.71
CASC9-201ENST00000504531 COL15A1P39059 1388 aa10.65□□□□□ -0.71
CASC9-201ENST00000504531 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 SRCAPQ6ZRS2 3230 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 PNMA6EA0A0J9YXQ4 647 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms