RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 ZNF576Q9H609 170 aa8.92□□□□□ -0.98
COPS4-203ENST00000504274 KRBA1A5PL33 1030 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 SOX1O00570 391 aaPredicted RBP8.91□□□□□ -0.98
COPS4-203ENST00000504274 FSCN2O14926 492 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 GNA15P30679 374 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 ZNF423Q2M1K9 1284 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 PRRT3Q5FWE3 981 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 DTWD1Q8N5C7 304 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 FOXD4L4Q8WXT5 416 aaPredicted RBP8.91□□□□□ -0.98
COPS4-203ENST00000504274 DCAF5Q96JK2 942 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 SPG7Q9UQ90 795 aa8.91□□□□□ -0.98
COPS4-203ENST00000504274 FAM177BA6PVY3 158 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 DLL1O00548 723 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 SPATA31C1P0DKV0 1188 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 ESRRAP11474 423 aaPredicted RBP8.9□□□□□ -0.98
COPS4-203ENST00000504274 CABP4P57796 275 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 PCDH1Q08174 1060 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 IKBKEQ14164 716 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 SHISA2Q6UWI4 295 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 C3orf58Q8NDZ4 430 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 SLC7A3Q8WY07 619 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 C12orf49Q9H741 205 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 KCNK4Q9NYG8 393 aa8.9□□□□□ -0.98
COPS4-203ENST00000504274 CCDC9Q9Y3X0 531 aaKnown RBP8.9□□□□□ -0.98
COPS4-203ENST00000504274 ELNP15502 786 aa8.89□□□□□ -0.99
COPS4-203ENST00000504274 DAB2P98082 770 aa8.89□□□□□ -0.99
COPS4-203ENST00000504274 FAAP100Q0VG06 881 aa8.89□□□□□ -0.99
COPS4-203ENST00000504274 DTHD1Q6ZMT9 781 aa8.89□□□□□ -0.99
COPS4-203ENST00000504274 KLHDC7BQ96G42 594 aa8.89□□□□□ -0.99
COPS4-203ENST00000504274 CLEC4MQ9H2X3 399 aaPredicted RBP8.89□□□□□ -0.99
COPS4-203ENST00000504274 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
COPS4-203ENST00000504274 GIPC1O14908 333 aa8.88□□□□□ -0.99
COPS4-203ENST00000504274 DDX3YO15523 660 aaKnown RBP8.88□□□□□ -0.99
COPS4-203ENST00000504274 SELPP16109 830 aa8.88□□□□□ -0.99
COPS4-203ENST00000504274 ZNF16P17020 682 aaPredicted RBP8.88□□□□□ -0.99
COPS4-203ENST00000504274 PIP4K2BP78356 416 aa8.88□□□□□ -0.99
COPS4-203ENST00000504274 PTPN12Q05209 780 aaKnown RBP8.88□□□□□ -0.99
COPS4-203ENST00000504274 FAM117BQ6P1L5 589 aa8.88□□□□□ -0.99
COPS4-203ENST00000504274 FRMD6Q96NE9 622 aa8.88□□□□□ -0.99
COPS4-203ENST00000504274 SEC31BQ9NQW1 1179 aa8.88□□□□□ -0.99
COPS4-203ENST00000504274 ADAM11O75078 769 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 GDF11O95390 407 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 USP17L7P0C7H9 530 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 FGD1P98174 961 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 XPCQ01831 940 aaPredicted RBP8.87□□□□□ -0.99
COPS4-203ENST00000504274 PSMD2Q13200 908 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
COPS4-203ENST00000504274 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
COPS4-203ENST00000504274 TMC4Q7Z404 712 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 PPP4R2Q9NY27 417 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 AKAP2Q9Y2D5 859 aa8.87□□□□□ -0.99
COPS4-203ENST00000504274 ITGB2P05107 769 aa8.86□□□□□ -0.99
COPS4-203ENST00000504274 EIF4BP23588 611 aaKnown RBP8.86□□□□□ -0.99
COPS4-203ENST00000504274 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
COPS4-203ENST00000504274 MAP4K3Q8IVH8 894 aa8.86□□□□□ -0.99
COPS4-203ENST00000504274 TMEM151AQ8N4L1 468 aa8.86□□□□□ -0.99
COPS4-203ENST00000504274 WNT8BQ93098 351 aa8.86□□□□□ -0.99
COPS4-203ENST00000504274 SRA1Q9HD15 236 aaKnown RBP8.86□□□□□ -0.99
COPS4-203ENST00000504274 OSGEPQ9NPF4 335 aa8.86□□□□□ -0.99
COPS4-203ENST00000504274 WISP1O95388 367 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 B3GALT4O96024 378 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 GSTT1P30711 240 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 CD68P34810 354 aaPredicted RBP8.85□□□□□ -0.99
COPS4-203ENST00000504274 CHRNA4P43681 627 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 C19orf57Q0VDD7 668 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
COPS4-203ENST00000504274 ALYREFQ86V81 257 aaKnown RBP8.85□□□□□ -0.99
COPS4-203ENST00000504274 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 FAM8A1Q9UBU6 413 aa8.85□□□□□ -0.99
COPS4-203ENST00000504274 RBM47A0AV96 593 aaKnown RBP8.84□□□□□ -0.99
COPS4-203ENST00000504274 CTSHP09668 335 aa8.84□□□□□ -0.99
COPS4-203ENST00000504274 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
COPS4-203ENST00000504274 NLRP12P59046 1061 aa8.84□□□□□ -0.99
COPS4-203ENST00000504274 GSTM4Q03013 218 aa8.84□□□□□ -0.99
COPS4-203ENST00000504274 RPS26P11Q5JNZ5 115 aaPredicted RBP8.84□□□□□ -0.99
COPS4-203ENST00000504274 CD163Q86VB7 1156 aa8.84□□□□□ -0.99
COPS4-203ENST00000504274 FBXO24O75426 580 aa8.83□□□□□ -1
COPS4-203ENST00000504274 APBA3O96018 575 aa8.83□□□□□ -1
COPS4-203ENST00000504274 SUZ12Q15022 739 aaKnown RBP8.83□□□□□ -1
COPS4-203ENST00000504274 IGF2-ASQ6U949 168 aa8.83□□□□□ -1
COPS4-203ENST00000504274 UBASH3BQ8TF42 649 aa8.83□□□□□ -1
COPS4-203ENST00000504274 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
COPS4-203ENST00000504274 C1QTNF9BB2RNN3 333 aa8.82□□□□□ -1
COPS4-203ENST00000504274 ARL4DP49703 201 aa8.82□□□□□ -1
COPS4-203ENST00000504274 TPTE2Q6XPS3 522 aa8.82□□□□□ -1
COPS4-203ENST00000504274 LENG1Q96BZ8 264 aaPredicted RBP8.82□□□□□ -1
COPS4-203ENST00000504274 TRIM56Q9BRZ2 755 aaKnown RBP8.82□□□□□ -1
COPS4-203ENST00000504274 NRSN2Q9GZP1 204 aa8.82□□□□□ -1
COPS4-203ENST00000504274 SORBS3O60504 671 aa8.81□□□□□ -1
COPS4-203ENST00000504274 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
COPS4-203ENST00000504274 GPN3Q9UHW5 284 aaPredicted RBP8.81□□□□□ -1
COPS4-203ENST00000504274 ALX3O95076 343 aa8.8□□□□□ -1
COPS4-203ENST00000504274 ECEL1O95672 775 aa8.8□□□□□ -1
COPS4-203ENST00000504274 DLGAP3O95886 979 aa8.8□□□□□ -1
COPS4-203ENST00000504274 CTSBP07858 339 aa8.8□□□□□ -1
COPS4-203ENST00000504274 MRPL58Q14197 206 aaKnown RBP8.8□□□□□ -1
COPS4-203ENST00000504274 PLA2G4EQ3MJ16 856 aa8.8□□□□□ -1
COPS4-203ENST00000504274 KIAA1211Q6ZU35 1233 aa8.8□□□□□ -1
COPS4-203ENST00000504274 VTI1BQ9UEU0 232 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms