RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 NEDD9Q14511 834 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 DHX8Q14562 1220 aaKnown RBP4.11□□□□□ -1.75
PCAT4-201ENST00000504263 NAA30Q147X3 362 aaPredicted RBP4.11□□□□□ -1.75
PCAT4-201ENST00000504263 MEX3CQ5U5Q3 659 aaKnown RBP4.11□□□□□ -1.75
PCAT4-201ENST00000504263 GTF3C6Q969F1 213 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 CARD11Q9BXL7 1154 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 ADAM21Q9UKJ8 722 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 PCDHB3Q9Y5E6 796 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 RPS6KL1Q9Y6S9 549 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 SPATA31A6Q5VVP1 1343 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 ROBO2Q9HCK4 1378 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 TRPM1Q7Z4N2 1603 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 PTCH1Q13635 1447 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 ADGRL3Q9HAR2 1447 aa4.11□□□□□ -1.75
PCAT4-201ENST00000504263 ST20-MTHFSA0A0A6YYL1 179 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 TTC24A2A3L6 582 aaPredicted RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 CAVIN2O95810 425 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 GCFC2P16383 781 aaKnown RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 CHMLP26374 656 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 MAGEA8P43361 318 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 CUL4AQ13619 759 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 SMC1AQ14683 1233 aaKnown RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 PTPN14Q15678 1187 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 E2F4Q16254 413 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 PDCD2Q16342 344 aaPredicted RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 CCDC158Q5M9N0 1113 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 TTLL5Q6EMB2 1281 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 TMEM132EQ6IEE7 984 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 ZSCAN25Q6NSZ9 544 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 TSHZ1Q6ZSZ6 1077 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 HS6ST3Q8IZP7 471 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 KLHL23Q8NBE8 558 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 CCDC26Q8TAB7 109 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 C16orf45Q96MC5 204 aaPredicted RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 TMX4Q9H1E5 349 aaPredicted RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 C14orf93Q9H972 538 aaKnown RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 CLIP2Q9UDT6 1046 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 FAM198AQ9UFP1 575 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 RGS17Q9UGC6 210 aaPredicted RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 ANAPC4Q9UJX5 808 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 ATXN2Q99700 1313 aaKnown RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 RTL1A6NKG5 1358 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 KDRP35968 1356 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 ABCC11Q96J66 1382 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 MST1RQ04912 1400 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 SETD1AO15047 1707 aaKnown RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 OAS2P29728 719 aaKnown RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 ELF1P32519 619 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 CD151P48509 253 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 RPIAP49247 311 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 TPD52L1Q16890 204 aaPredicted RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 SLC5A9Q2M3M2 681 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 ESCO1Q5FWF5 840 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 AP1ARQ63HQ0 302 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 WAPLQ7Z5K2 1190 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 PLA2G4DQ86XP0 818 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 WDR63Q8IWG1 891 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 MICALL1Q8N3F8 863 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 GALNT6Q8NCL4 622 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 GIMAP7Q8NHV1 300 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 IL17RAQ96F46 866 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 DDX11Q96FC9 970 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 THUMPD2Q9BTF0 503 aaKnown RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 VEZTQ9HBM0 779 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 IFT57Q9NWB7 429 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 MCM8Q9UJA3 840 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 DDX19BQ9UMR2 479 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 POLR3AO14802 1390 aaPredicted RBP4.1□□□□□ -1.75
PCAT4-201ENST00000504263 IFT172Q9UG01 1749 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 MYOM2P54296 1465 aa4.1□□□□□ -1.75
PCAT4-201ENST00000504263 COL16A1Q07092 1604 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 AHDC1Q5TGY3 1603 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 NUTM2BA6NNL0 878 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 NUTM2EB1AL46 878 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 IPO8O15397 1037 aaKnown RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 AP5Z1O43299 807 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 RTN2O75298 545 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 PPFIA4O75335 1185 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 CDC45O75419 566 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 TBC1D8O95759 1140 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 SETSIPP0DME0 302 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 HCLS1P14317 486 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 PTGS1P23219 599 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 PPP2R1AP30153 589 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 PRPHP41219 470 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 UBE2HP62256 183 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 PKP1Q13835 747 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 NKX1-1Q15270 411 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 CCDC27Q2M243 656 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 CFAP70Q5T0N1 1121 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 C1QTNF12Q5T7M4 302 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 ZNF772Q68DY9 489 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 WWC2Q6AWC2 1192 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 GBP6Q6ZN66 633 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 TBC1D9Q6ZT07 1266 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 NUTM2AQ8IVF1 878 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 ANKRD18AQ8IVF6 992 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 MPNDQ8N594 471 aa4.09□□□□□ -1.75
PCAT4-201ENST00000504263 ZNF513Q8N8E2 541 aaPredicted RBP4.09□□□□□ -1.75
PCAT4-201ENST00000504263 ARMC2Q8NEN0 867 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms