RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NBPF12Q5TAG4 269 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-210ENST00000503827 CHRDL2Q6WN34 429 aa20.39■□□□□ 0.85
PDLIM7-210ENST00000503827 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
PDLIM7-210ENST00000503827 VEZTQ9HBM0 779 aa20.39■□□□□ 0.85
PDLIM7-210ENST00000503827 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
PDLIM7-210ENST00000503827 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
PDLIM7-210ENST00000503827 CLRN2A0PK11 232 aa20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 DLL1O00548 723 aa20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 MYCP01106 439 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 KLRK1P26718 216 aa20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 KCNJ4P48050 445 aa20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 TAF1CQ15572 869 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 CD209Q9NNX6 404 aa20.38■□□□□ 0.85
PDLIM7-210ENST00000503827 ELP3Q9H9T3 547 aa20.37■□□□□ 0.85
PDLIM7-210ENST00000503827 MAP3K2Q9Y2U5 619 aa20.37■□□□□ 0.85
PDLIM7-210ENST00000503827 SPDYE2BA6NHP3 402 aa20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 SPDYE6P0CI01 402 aa20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 CERS5Q8N5B7 392 aa20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 SLC17A8Q8NDX2 589 aa20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 MS4A4AQ96JQ5 239 aa20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 PRMT6Q96LA8 375 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 MPHOSPH8Q99549 860 aa20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 PCDHAC2Q9Y5I4 1007 aa20.36■□□□□ 0.85
PDLIM7-210ENST00000503827 F8W031 263 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-210ENST00000503827 WDHD1O75717 1129 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-210ENST00000503827 NEXNQ0ZGT2 675 aa20.35■□□□□ 0.85
PDLIM7-210ENST00000503827 RASA3Q14644 834 aa20.35■□□□□ 0.85
PDLIM7-210ENST00000503827 DPF3Q92784 378 aa20.35■□□□□ 0.85
PDLIM7-210ENST00000503827 CHMP4AQ9BY43 222 aa20.35■□□□□ 0.85
PDLIM7-210ENST00000503827 IGKV5-2P06315 115 aa20.34■□□□□ 0.85
PDLIM7-210ENST00000503827 KIF22Q14807 665 aa20.34■□□□□ 0.85
PDLIM7-210ENST00000503827 SH3TC2Q8TF17 1288 aa20.34■□□□□ 0.85
PDLIM7-210ENST00000503827 RBM27Q9P2N5 1060 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-210ENST00000503827 ZSWIM8A7E2V4 1837 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 CCL15-CCL14A0A0B4J2E2 113 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 ITGA6P23229 1130 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 GTF2A2P52657 109 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 RALBP1Q15311 655 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 CCL15Q16663 113 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 KSR2Q6VAB6 950 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 BRI3BPQ8WY22 251 aa20.33■□□□□ 0.85
PDLIM7-210ENST00000503827 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
PDLIM7-210ENST00000503827 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-210ENST00000503827 CHRNDQ07001 517 aa20.32■□□□□ 0.84
PDLIM7-210ENST00000503827 CCDC30Q5VVM6 783 aa20.32■□□□□ 0.84
PDLIM7-210ENST00000503827 PI4KAP2A4QPH2 592 aa20.31■□□□□ 0.84
PDLIM7-210ENST00000503827 WDR43Q15061 677 aaKnown RBP eCLIP20.31■□□□□ 0.84
PDLIM7-210ENST00000503827 UBE3BQ7Z3V4 1068 aa20.31■□□□□ 0.84
PDLIM7-210ENST00000503827 PI4KAP1Q8N8J0 262 aa20.31■□□□□ 0.84
PDLIM7-210ENST00000503827 SZT2Q5T011 3432 aa20.31■□□□□ 0.84
PDLIM7-210ENST00000503827 H7C1W4 665 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 GNRH1P01148 92 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 PRMT2P55345 433 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 GNAI1P63096 354 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 CWF19L2Q2TBE0 894 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 ZNF804AQ7Z570 1209 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 FAM43AQ8N2R8 423 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 A0A1B0GUL6 1792 aa20.3■□□□□ 0.84
PDLIM7-210ENST00000503827 AOX1Q06278 1338 aa20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 NEURL1BA8MQ27 555 aa20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 IL1R1P14778 569 aa20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 LACTBP83111 547 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 C15orf52Q6ZUT6 534 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 CSADQ9Y600 493 aa20.29■□□□□ 0.84
PDLIM7-210ENST00000503827 TLR2O60603 784 aa20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 MAP3K9P80192 1104 aa20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 VGLL4Q14135 290 aa20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 NKX2-3Q8TAU0 364 aa20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 HTATIP2Q9BUP3 242 aa20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 PLA2G12BQ9BX93 195 aa20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 ARHGAP39Q9C0H5 1083 aa20.28■□□□□ 0.84
PDLIM7-210ENST00000503827 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
PDLIM7-210ENST00000503827 ARAP2Q8WZ64 1704 aa20.27■□□□□ 0.84
PDLIM7-210ENST00000503827 SPDYE2Q495Y8 402 aa20.27■□□□□ 0.84
PDLIM7-210ENST00000503827 C8orf58Q8NAV2 365 aa20.27■□□□□ 0.84
PDLIM7-210ENST00000503827 ZCCHC17Q9NP64 241 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-210ENST00000503827 ZNF70Q9UC06 446 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-210ENST00000503827 SNAP23O00161 211 aa20.26■□□□□ 0.83
PDLIM7-210ENST00000503827 TAF5LO75529 589 aa20.26■□□□□ 0.83
PDLIM7-210ENST00000503827 CSF1RP07333 972 aa20.26■□□□□ 0.83
PDLIM7-210ENST00000503827 SHISA4Q96DD7 197 aa20.26■□□□□ 0.83
PDLIM7-210ENST00000503827 JAG2Q9Y219 1238 aa20.26■□□□□ 0.83
PDLIM7-210ENST00000503827 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 CETPP11597 493 aa20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 TNNI2P48788 182 aa20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 MTFR1Q15390 333 aa20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 TEPSINQ96N21 525 aa20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 TDRD3Q9H7E2 651 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms