RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 TAF1P21675 1872 aa9.07□□□□□ -0.96
RFC1-206ENST00000503784 WNT10BO00744 389 aa9.07□□□□□ -0.96
RFC1-206ENST00000503784 HTATSF1O43719 755 aaKnown RBP9.07□□□□□ -0.96
RFC1-206ENST00000503784 ECM2O94769 699 aaPredicted RBP9.07□□□□□ -0.96
RFC1-206ENST00000503784 INHBEP58166 350 aa9.07□□□□□ -0.96
RFC1-206ENST00000503784 PDIA6Q15084 440 aa9.07□□□□□ -0.96
RFC1-206ENST00000503784 COPS6Q7L5N1 327 aa9.07□□□□□ -0.96
RFC1-206ENST00000503784 SHISA4Q96DD7 197 aa9.07□□□□□ -0.96
RFC1-206ENST00000503784 NUDCQ9Y266 331 aa9.07□□□□□ -0.96
RFC1-206ENST00000503784 CEP290O15078 2479 aa9.06□□□□□ -0.96
RFC1-206ENST00000503784 ZBTB48P10074 688 aaPredicted RBP9.06□□□□□ -0.96
RFC1-206ENST00000503784 GJA5P36382 358 aa9.06□□□□□ -0.96
RFC1-206ENST00000503784 RPS8P62241 208 aaKnown RBP9.06□□□□□ -0.96
RFC1-206ENST00000503784 GOLGA2Q08379 1002 aa9.06□□□□□ -0.96
RFC1-206ENST00000503784 OTUD7BQ6GQQ9 843 aa9.06□□□□□ -0.96
RFC1-206ENST00000503784 APOBEC3FQ8IUX4 373 aaKnown RBP9.06□□□□□ -0.96
RFC1-206ENST00000503784 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
RFC1-206ENST00000503784 COL25A1Q9BXS0 654 aaPredicted RBP9.06□□□□□ -0.96
RFC1-206ENST00000503784 PRO3102Q9H379 93 aa9.06□□□□□ -0.96
RFC1-206ENST00000503784 ANKRD36CQ5JPF3 1778 aa9.06□□□□□ -0.96
RFC1-206ENST00000503784 SF3B3Q15393 1217 aaKnown RBP9.05□□□□□ -0.96
RFC1-206ENST00000503784 Q7L0L9 218 aa9.05□□□□□ -0.96
RFC1-206ENST00000503784 RNF166Q96A37 237 aaPredicted RBP9.05□□□□□ -0.96
RFC1-206ENST00000503784 PTPN18Q99952 460 aa9.05□□□□□ -0.96
RFC1-206ENST00000503784 SEC31BQ9NQW1 1179 aa9.05□□□□□ -0.96
RFC1-206ENST00000503784 PODXL2Q9NZ53 605 aa9.05□□□□□ -0.96
RFC1-206ENST00000503784 KDM3BQ7LBC6 1761 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 SSC5DA1L4H1 1573 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 ATP5J2-PTCD1G3V325 749 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 PER1O15534 1290 aaPredicted RBP9.04□□□□□ -0.96
RFC1-206ENST00000503784 HOXB1P14653 301 aaPredicted RBP9.04□□□□□ -0.96
RFC1-206ENST00000503784 MTFR1Q15390 333 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 ZNF467Q7Z7K2 595 aaPredicted RBP9.04□□□□□ -0.96
RFC1-206ENST00000503784 DEFB123Q8N688 67 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
RFC1-206ENST00000503784 HTATIP2Q9BUP3 242 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 ARHGAP39Q9C0H5 1083 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 TSPYL4Q9UJ04 414 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 NR2E3Q9Y5X4 410 aa9.04□□□□□ -0.96
RFC1-206ENST00000503784 IRS4O14654 1257 aaPredicted RBP9.03□□□□□ -0.96
RFC1-206ENST00000503784 ZBTB7BO15156 539 aaPredicted RBP9.03□□□□□ -0.96
RFC1-206ENST00000503784 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
RFC1-206ENST00000503784 ARHGEF6Q15052 776 aa9.03□□□□□ -0.96
RFC1-206ENST00000503784 TAF1CQ15572 869 aaPredicted RBP9.03□□□□□ -0.96
RFC1-206ENST00000503784 DACT2Q5SW24 774 aa9.03□□□□□ -0.96
RFC1-206ENST00000503784 KIAA0825Q8IV33 1275 aa9.03□□□□□ -0.96
RFC1-206ENST00000503784 DEFB129Q9H1M3 183 aa9.03□□□□□ -0.96
RFC1-206ENST00000503784 PODNQ7Z5L7 613 aa9.02□□□□□ -0.97
RFC1-206ENST00000503784 ELP3Q9H9T3 547 aa9.02□□□□□ -0.97
RFC1-206ENST00000503784 STAP2Q9UGK3 403 aa9.02□□□□□ -0.97
RFC1-206ENST00000503784 XDHP47989 1333 aa9.02□□□□□ -0.97
RFC1-206ENST00000503784 LAMA3Q16787 3333 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 A0A1W2PPC1 479 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 CLRN2A0PK11 232 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 NEFMP07197 916 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 MAP3K11Q16584 847 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 BRI3BPQ8WY22 251 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 OPTNQ96CV9 577 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 ZFYVE28Q9HCC9 887 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 STXBP5LQ9Y2K9 1186 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 MYO3BQ8WXR4 1341 aa9.01□□□□□ -0.97
RFC1-206ENST00000503784 CCL15-CCL14A0A0B4J2E2 113 aa9□□□□□ -0.97
RFC1-206ENST00000503784 EVI5O60447 810 aa9□□□□□ -0.97
RFC1-206ENST00000503784 FARP2O94887 1054 aaPredicted RBP9□□□□□ -0.97
RFC1-206ENST00000503784 ATP2B4P23634 1241 aa9□□□□□ -0.97
RFC1-206ENST00000503784 IREB2P48200 963 aaKnown RBP9□□□□□ -0.97
RFC1-206ENST00000503784 KIF22Q14807 665 aa9□□□□□ -0.97
RFC1-206ENST00000503784 CCL15Q16663 113 aa9□□□□□ -0.97
RFC1-206ENST00000503784 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
RFC1-206ENST00000503784 ISCA1Q9BUE6 129 aa9□□□□□ -0.97
RFC1-206ENST00000503784 VEZTQ9HBM0 779 aa9□□□□□ -0.97
RFC1-206ENST00000503784 CHPF2Q9P2E5 772 aa9□□□□□ -0.97
RFC1-206ENST00000503784 PCDHAC2Q9Y5I4 1007 aa9□□□□□ -0.97
RFC1-206ENST00000503784 COL1A1P02452 1464 aaPredicted RBP9□□□□□ -0.97
RFC1-206ENST00000503784 TESPA1A2RU30 521 aaPredicted RBP8.99□□□□□ -0.97
RFC1-206ENST00000503784 CCL5P13501 91 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 PSEN1P49768 467 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 LACTBP83111 547 aaPredicted RBP8.99□□□□□ -0.97
RFC1-206ENST00000503784 DLGAP5Q15398 846 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 KRT24Q2M2I5 525 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 CCDC152Q4G0S7 254 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 NBPF12Q5TAG4 269 aaPredicted RBP8.99□□□□□ -0.97
RFC1-206ENST00000503784 STRIP1Q5VSL9 837 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 UBE2Q1Q7Z7E8 422 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 ANKRD18AQ8IVF6 992 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 ANKRD13AQ8IZ07 590 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 FAM43AQ8N2R8 423 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 JARID2Q92833 1246 aaPredicted RBP8.99□□□□□ -0.97
RFC1-206ENST00000503784 MS4A4AQ96JQ5 239 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 RNF208Q9H0X6 261 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 BIN2Q9UBW5 565 aaPredicted RBP8.99□□□□□ -0.97
RFC1-206ENST00000503784 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 MED23Q9ULK4 1368 aa8.99□□□□□ -0.97
RFC1-206ENST00000503784 F8W031 263 aaPredicted RBP8.98□□□□□ -0.97
RFC1-206ENST00000503784 USP2O75604 605 aaPredicted RBP8.98□□□□□ -0.97
RFC1-206ENST00000503784 GJA8P48165 433 aa8.98□□□□□ -0.97
RFC1-206ENST00000503784 NFE2L2Q16236 605 aa8.98□□□□□ -0.97
RFC1-206ENST00000503784 SUPT20HL1Q3ZLR7 823 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms