RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 HCN2Q9UL51 889 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 TRAK1Q9UPV9 953 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
SMN2-204ENST00000503678 ALAS2P22557 587 aa6.79□□□□□ -1.32
SMN2-204ENST00000503678 CES1P23141 567 aa6.79□□□□□ -1.32
SMN2-204ENST00000503678 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
SMN2-204ENST00000503678 GRM2Q14416 872 aa6.79□□□□□ -1.32
SMN2-204ENST00000503678 ZNF468Q5VIY5 522 aaPredicted RBP6.79□□□□□ -1.32
SMN2-204ENST00000503678 TTC39BQ5VTQ0 682 aaPredicted RBP6.79□□□□□ -1.32
SMN2-204ENST00000503678 MCF2L2Q86YR7 1114 aa6.79□□□□□ -1.32
SMN2-204ENST00000503678 GPRASP2Q96D09 838 aa6.79□□□□□ -1.32
SMN2-204ENST00000503678 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
SMN2-204ENST00000503678 ELOA3DA6NLF2 546 aaPredicted RBP6.78□□□□□ -1.32
SMN2-204ENST00000503678 FGRP09769 529 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 EDN3P14138 238 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 ATF4P18848 351 aaPredicted RBP6.78□□□□□ -1.32
SMN2-204ENST00000503678 PAK2Q13177 524 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 TRIM28Q13263 835 aaKnown RBP6.78□□□□□ -1.32
SMN2-204ENST00000503678 PWP1Q13610 501 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 LAMC2Q13753 1193 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 ELOA3BQ3SY89 546 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 ELOA3Q8NG57 546 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 ANKRD24Q8TF21 1146 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMN2-204ENST00000503678 RSRP1Q9BUV0 290 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 BRD7Q9NPI1 651 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
SMN2-204ENST00000503678 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
SMN2-204ENST00000503678 STK10O94804 968 aaKnown RBP6.77□□□□□ -1.33
SMN2-204ENST00000503678 XRCC5P13010 732 aaKnown RBP6.77□□□□□ -1.33
SMN2-204ENST00000503678 NCLP19338 710 aaKnown RBP6.77□□□□□ -1.33
SMN2-204ENST00000503678 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
SMN2-204ENST00000503678 KCNQ4P56696 695 aa6.77□□□□□ -1.33
SMN2-204ENST00000503678 CCDC144BQ3MJ40 725 aa6.77□□□□□ -1.33
SMN2-204ENST00000503678 RASGRP4Q8TDF6 673 aa6.77□□□□□ -1.33
SMN2-204ENST00000503678 EHD4Q9H223 541 aa6.77□□□□□ -1.33
SMN2-204ENST00000503678 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
SMN2-204ENST00000503678 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
SMN2-204ENST00000503678 RLBP1P12271 317 aa6.76□□□□□ -1.33
SMN2-204ENST00000503678 PRPF40BQ6NWY9 871 aaKnown RBP6.76□□□□□ -1.33
SMN2-204ENST00000503678 C3orf58Q8NDZ4 430 aa6.76□□□□□ -1.33
SMN2-204ENST00000503678 GLIS3Q8NEA6 775 aa6.76□□□□□ -1.33
SMN2-204ENST00000503678 COPRSQ9NQ92 184 aa6.76□□□□□ -1.33
SMN2-204ENST00000503678 PRDM6Q9NQX0 595 aa6.76□□□□□ -1.33
SMN2-204ENST00000503678 KBTBD4Q9NVX7 518 aa6.76□□□□□ -1.33
SMN2-204ENST00000503678 A0A1W2PP55 124 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 C9orf172C9J069 976 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
SMN2-204ENST00000503678 SYT9Q86SS6 491 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 RELL1Q8IUW5 271 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 PMFBP1Q8TBY8 1022 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 MDFIQ99750 246 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 SPON2Q9BUD6 331 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 STRN4Q9NRL3 753 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 KCNH4Q9UQ05 1017 aa6.75□□□□□ -1.33
SMN2-204ENST00000503678 TLDC2A0PJX2 215 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 EFSO43281 561 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 CCDC85BQ15834 202 aaPredicted RBP6.74□□□□□ -1.33
SMN2-204ENST00000503678 GRIK4Q16099 956 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 PEAR1Q5VY43 1037 aaPredicted RBP6.74□□□□□ -1.33
SMN2-204ENST00000503678 KIAA0825Q8IV33 1275 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 OR13H1Q8NG92 308 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 OSBPL2Q9H1P3 480 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 ZFYVE1Q9HBF4 777 aa6.74□□□□□ -1.33
SMN2-204ENST00000503678 TMEM238LA0A1B0GVL6 79 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 TXKP42681 527 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 CCINQ13939 588 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 NBPF6Q5VWK0 638 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 MCTP1Q6DN14 999 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 SV2BQ7L1I2 683 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 NBPF4Q96M43 638 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 TMEM74Q96NL1 305 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 ZSWIM4Q9H7M6 989 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 LATS2Q9NRM7 1088 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 KANSL3Q9P2N6 904 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 SALL4Q9UJQ4 1053 aa6.73□□□□□ -1.33
SMN2-204ENST00000503678 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 SASH3O75995 380 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 CYP2E1P05181 493 aaPredicted RBP6.72□□□□□ -1.33
SMN2-204ENST00000503678 SOX18P35713 384 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 FCGRTP55899 365 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 GSX2Q9BZM3 304 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 LIN7BQ9HAP6 207 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 ABCB6Q9NP58 842 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 ADAMTS1Q9UHI8 967 aa6.72□□□□□ -1.33
SMN2-204ENST00000503678 COL17A1Q9UMD9 1497 aaPredicted RBP6.72□□□□□ -1.33
SMN2-204ENST00000503678 M0R082 166 aa6.71□□□□□ -1.34
SMN2-204ENST00000503678 PPM1GO15355 546 aaPredicted RBP6.71□□□□□ -1.34
SMN2-204ENST00000503678 PAX4O43316 350 aa6.71□□□□□ -1.34
SMN2-204ENST00000503678 MMP20O60882 483 aa6.71□□□□□ -1.34
SMN2-204ENST00000503678 COBLO75128 1261 aa6.71□□□□□ -1.34
SMN2-204ENST00000503678 SIN3BO75182 1162 aa6.71□□□□□ -1.34
SMN2-204ENST00000503678 RARAP10276 462 aa6.71□□□□□ -1.34
SMN2-204ENST00000503678 TARSP26639 723 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms