RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ZNF646O15015 1829 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-209ENST00000503346 TBC1D10BQ4KMP7 808 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-209ENST00000503346 MAP1SQ66K74 1059 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-209ENST00000503346 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-209ENST00000503346 ZBTB22O15209 634 aa22.54■■□□□ 1.2
PDLIM7-209ENST00000503346 ITGBL1O95965 494 aaPredicted RBP22.54■■□□□ 1.2
PDLIM7-209ENST00000503346 KIF4BQ2VIQ3 1234 aa22.54■■□□□ 1.2
PDLIM7-209ENST00000503346 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
PDLIM7-209ENST00000503346 CNTROBQ8N137 903 aa22.54■■□□□ 1.2
PDLIM7-209ENST00000503346 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
PDLIM7-209ENST00000503346 A0A1B0GUL7 405 aa22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 TIMM10P62072 90 aa22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 RBM26Q5T8P6 1007 aaKnown RBP22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 KIAA0825Q8IV33 1275 aa22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 MYOZ2Q9NPC6 264 aa22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 IQSEC3Q9UPP2 1182 aaPredicted RBP22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 JAG2Q9Y219 1238 aa22.53■■□□□ 1.2
PDLIM7-209ENST00000503346 HMMRO75330 724 aa22.52■■□□□ 1.2
PDLIM7-209ENST00000503346 ADORA1P30542 326 aa22.52■■□□□ 1.2
PDLIM7-209ENST00000503346 OS9Q13438 667 aaPredicted RBP22.52■■□□□ 1.2
PDLIM7-209ENST00000503346 HDAC9Q9UKV0 1011 aa22.52■■□□□ 1.2
PDLIM7-209ENST00000503346 PASKQ96RG2 1323 aa22.52■■□□□ 1.2
PDLIM7-209ENST00000503346 FRAT2O75474 233 aaPredicted RBP22.51■■□□□ 1.19
PDLIM7-209ENST00000503346 MFSD14BQ5SR56 506 aa22.51■■□□□ 1.19
PDLIM7-209ENST00000503346 TBC1D22AQ8WUA7 517 aa22.51■■□□□ 1.19
PDLIM7-209ENST00000503346 XAGE2Q96GT9 111 aa22.51■■□□□ 1.19
PDLIM7-209ENST00000503346 GNL3LQ9NVN8 582 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-209ENST00000503346 PHKA1P46020 1223 aa22.5■■□□□ 1.19
PDLIM7-209ENST00000503346 APLP1P51693 650 aa22.5■■□□□ 1.19
PDLIM7-209ENST00000503346 CHAF1AQ13111 956 aaPredicted RBP22.5■■□□□ 1.19
PDLIM7-209ENST00000503346 CCDC102BQ68D86 513 aa22.5■■□□□ 1.19
PDLIM7-209ENST00000503346 SEMA3EO15041 775 aa22.49■■□□□ 1.19
PDLIM7-209ENST00000503346 HSP90AB4PQ58FF6 505 aa22.49■■□□□ 1.19
PDLIM7-209ENST00000503346 ERC1Q8IUD2 1116 aa22.49■■□□□ 1.19
PDLIM7-209ENST00000503346 SCARF1Q14162 830 aa22.48■■□□□ 1.19
PDLIM7-209ENST00000503346 TNNI3KQ59H18 835 aa22.48■■□□□ 1.19
PDLIM7-209ENST00000503346 NEUROD6Q96NK8 337 aa22.48■■□□□ 1.19
PDLIM7-209ENST00000503346 EXOC6BQ9Y2D4 811 aa22.48■■□□□ 1.19
PDLIM7-209ENST00000503346 FPGT-TNNI3KV9GXZ4 949 aa22.48■■□□□ 1.19
PDLIM7-209ENST00000503346 CDC37L1Q7L3B6 337 aa22.47■■□□□ 1.19
PDLIM7-209ENST00000503346 MTMR14Q8NCE2 650 aa22.47■■□□□ 1.19
PDLIM7-209ENST00000503346 WDR66Q8TBY9 1149 aa22.47■■□□□ 1.19
PDLIM7-209ENST00000503346 ZBED3Q96IU2 234 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-209ENST00000503346 DENND2AQ9ULE3 1009 aa22.47■■□□□ 1.19
PDLIM7-209ENST00000503346 ARAP2Q8WZ64 1704 aa22.47■■□□□ 1.19
PDLIM7-209ENST00000503346 COL1A1P02452 1464 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-209ENST00000503346 F8W031 263 aaPredicted RBP22.46■■□□□ 1.19
PDLIM7-209ENST00000503346 WNT10BO00744 389 aa22.46■■□□□ 1.19
PDLIM7-209ENST00000503346 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
PDLIM7-209ENST00000503346 GGA3Q9NZ52 723 aa22.46■■□□□ 1.19
PDLIM7-209ENST00000503346 SUGT1Q9Y2Z0 365 aa22.46■■□□□ 1.19
PDLIM7-209ENST00000503346 NBPF9Q3BBW0 867 aa22.45■■□□□ 1.18
PDLIM7-209ENST00000503346 DCPSQ96C86 337 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-209ENST00000503346 GLIS2Q9BZE0 524 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-209ENST00000503346 TTF2Q9UNY4 1162 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-209ENST00000503346 ASTN2O75129 1339 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-209ENST00000503346 RASGRF1Q13972 1273 aa22.44■■□□□ 1.18
PDLIM7-209ENST00000503346 GRIK5Q16478 980 aa22.44■■□□□ 1.18
PDLIM7-209ENST00000503346 PDS5AQ29RF7 1337 aaKnown RBP22.44■■□□□ 1.18
PDLIM7-209ENST00000503346 PITPNM2Q9BZ72 1349 aa22.44■■□□□ 1.18
PDLIM7-209ENST00000503346 SERPINA10Q9UK55 444 aa22.44■■□□□ 1.18
PDLIM7-209ENST00000503346 SALL1Q9NSC2 1324 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 TRAF5O00463 557 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 RAB11FIP3O75154 756 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 DLGAP5Q15398 846 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 CFAP100Q494V2 611 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 GORABQ5T7V8 394 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 ANGEL2Q5VTE6 544 aaKnown RBP22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 KRT26Q7Z3Y9 468 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 RHPN1Q8TCX5 695 aa22.43■■□□□ 1.18
PDLIM7-209ENST00000503346 ARID4AP29374 1257 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 HDLBPQ00341 1268 aaKnown RBP22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 USP48Q86UV5 1035 aa22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 EAF2Q96CJ1 260 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 KIF1BPQ96EK5 621 aa22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 DBNDD2Q9BQY9 259 aa22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 MRIQ9BWK5 157 aa22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
PDLIM7-209ENST00000503346 SPDYE2BA6NHP3 402 aa22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 TMEM88BA6NKF7 163 aa22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 UQCRFS1P1P0C7P4 283 aa22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 SPDYE6P0CI01 402 aa22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 FMR1Q06787 632 aaKnown RBP eCLIP22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 SULF1Q8IWU6 871 aa22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 DBNLQ9UJU6 430 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 SUPT16HQ9Y5B9 1047 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 PCDHB15Q9Y5E8 787 aa22.41■■□□□ 1.18
PDLIM7-209ENST00000503346 MAST3O60307 1309 aa22.4■■□□□ 1.18
PDLIM7-209ENST00000503346 CRKP46108 304 aa22.4■■□□□ 1.18
PDLIM7-209ENST00000503346 HTRA3P83110 453 aa22.4■■□□□ 1.18
PDLIM7-209ENST00000503346 PRMT6Q96LA8 375 aaPredicted RBP22.4■■□□□ 1.18
PDLIM7-209ENST00000503346 PCDHAC2Q9Y5I4 1007 aa22.4■■□□□ 1.18
PDLIM7-209ENST00000503346 ADM5C9JUS6 153 aa22.39■■□□□ 1.17
PDLIM7-209ENST00000503346 AAMPQ13685 434 aa22.39■■□□□ 1.17
PDLIM7-209ENST00000503346 CCDC158Q5M9N0 1113 aa22.39■■□□□ 1.17
PDLIM7-209ENST00000503346 ZGPATQ8N5A5 531 aaKnown RBP22.39■■□□□ 1.17
PDLIM7-209ENST00000503346 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.17
PDLIM7-209ENST00000503346 CCDC8Q9H0W5 538 aaPredicted RBP22.39■■□□□ 1.17
PDLIM7-209ENST00000503346 IL1RAPL2Q9NP60 686 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms