RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 TMEM51Q9NW97 253 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 CHIC2Q9UKJ5 165 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 PCDHB11Q9Y5F2 797 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 MORC2Q9Y6X9 1032 aaPredicted RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 ESPNB1AK53 854 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 RBP3P10745 1247 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 CASP2P42575 452 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 GPSM2P81274 684 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 SSRP1Q08945 709 aaKnown RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 BIRC3Q13489 604 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 MTMR1Q13613 665 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 CBX2Q14781 532 aaPredicted RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 RGL3Q3MIN7 710 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 CCDC92Q53HC0 331 aaPredicted RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 ERMP1Q7Z2K6 904 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 CLASRPQ8N2M8 674 aaKnown RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 BORCS6Q96GS4 357 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 EAF1Q96JC9 268 aaPredicted RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 SRRTQ9BXP5 876 aaKnown RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 RTFDC1Q9BY42 306 aaPredicted RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 PCGF6Q9BYE7 350 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 ALDH8A1Q9H2A2 487 aaPredicted RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 FOXO3O43524 673 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 GFOD2Q3B7J2 385 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 FAM26DQ5JW98 314 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 SWT1Q5T5J6 900 aaKnown RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 OTUD5Q96G74 571 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 NGLY1Q96IV0 654 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 KCNK17Q96T54 332 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 ARHGAP9Q9BRR9 750 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 TRIM56Q9BRZ2 755 aaKnown RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 CDV3Q9UKY7 258 aaKnown RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 PLAAQ9Y263 795 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 ATAD2Q6PL18 1390 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 TRIM6-TRIM34B2RNG4 842 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 PPP1R12BO60237 982 aaPredicted RBP4.55□□□□□ -1.68
SUB1-202ENST00000502453 DDAH1O94760 285 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 FAM200BP0CF97 657 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 CHAF1AQ13111 956 aaPredicted RBP4.55□□□□□ -1.68
SUB1-202ENST00000502453 STK3Q13188 491 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 CNNM4Q6P4Q7 775 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 LRP10Q7Z4F1 713 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 ZNF296Q8WUU4 475 aaPredicted RBP4.55□□□□□ -1.68
SUB1-202ENST00000502453 MPP4Q96JB8 637 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 GJA3Q9Y6H8 435 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 KCNQ2O43526 872 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 IGFBP4P22692 258 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 EIF4A3P38919 411 aaKnown RBP4.55□□□□□ -1.68
SUB1-202ENST00000502453 USP4Q13107 963 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 DGKHQ86XP1 1220 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 CHCHD4Q8N4Q1 142 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 THAP3Q8WTV1 239 aaPredicted RBP4.55□□□□□ -1.68
SUB1-202ENST00000502453 CCDC113Q9H0I3 377 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 IP6K2Q9UHH9 426 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 NUCB1Q02818 461 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 TPH2Q8IWU9 490 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 COL26A1Q96A83 441 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 CDH19Q9H159 772 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 BCL2L12Q9HB09 334 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 ZNF358Q9NW07 568 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 SERTAD1Q9UHV2 236 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 PGRP06401 933 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 CFHP08603 1231 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 TNFAIP3P21580 790 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 ATP6V1AP38606 617 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 DMRTA1Q5VZB9 504 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 NXPE4Q6UWF7 544 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 PACS2Q86VP3 889 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 ZSCAN30Q86W11 494 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 SNRNP27Q8WVK2 155 aaKnown RBP4.55□□□□□ -1.68
SUB1-202ENST00000502453 LRGUKQ96M69 825 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 NGRNQ9NPE2 291 aaKnown RBP4.55□□□□□ -1.68
SUB1-202ENST00000502453 CLIC5Q9NZA1 410 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 STRIP2Q9ULQ0 834 aa4.55□□□□□ -1.68
SUB1-202ENST00000502453 RRP9O43818 475 aaKnown RBP4.54□□□□□ -1.68
SUB1-202ENST00000502453 TGFB3P10600 412 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 ZSCAN20P17040 1043 aaPredicted RBP4.54□□□□□ -1.68
SUB1-202ENST00000502453 IRX3P78415 501 aaPredicted RBP4.54□□□□□ -1.68
SUB1-202ENST00000502453 TRIM14Q14142 442 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 COBLL1Q53SF7 1204 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 PERM1Q5SV97 790 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 LEO1Q8WVC0 666 aaPredicted RBP4.54□□□□□ -1.68
SUB1-202ENST00000502453 MARVELD3Q96A59 401 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 TRIM44Q96DX7 344 aaPredicted RBP4.54□□□□□ -1.68
SUB1-202ENST00000502453 ACTR10Q9NZ32 417 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 A0A1W2PRU2 124 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 SERPINB3P29508 390 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 PMLP29590 882 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 ADD2P35612 726 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 MORC3Q14149 939 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 PUM3Q15397 648 aaKnown RBP4.54□□□□□ -1.68
SUB1-202ENST00000502453 RELL1Q8IUW5 271 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 GJD3Q8N144 294 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 MSRB2Q9Y3D2 182 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 RASGRF1Q13972 1273 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 SPECC1Q5M775 1068 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 GPR152Q8TDT2 470 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 RSPH1Q8WYR4 309 aa4.54□□□□□ -1.68
SUB1-202ENST00000502453 MYCBPQ99417 103 aaPredicted RBP4.54□□□□□ -1.68
SUB1-202ENST00000502453 ZNF700Q9H0M5 742 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms