RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 ADAMTSL1Q8N6G6 1762 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 A0A1B0GUL7 405 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 F8W031 263 aaPredicted RBP9.02□□□□□ -0.97
USP46-203ENST00000502443 HMMRO75330 724 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 ADORA1P30542 326 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
USP46-203ENST00000502443 ZNF280AP59817 542 aaPredicted RBP9.02□□□□□ -0.97
USP46-203ENST00000502443 CHAF1AQ13111 956 aaPredicted RBP9.02□□□□□ -0.97
USP46-203ENST00000502443 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 MFSD14BQ5SR56 506 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 CNTROBQ8N137 903 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 CERS5Q8N5B7 392 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 NEUROD6Q96NK8 337 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 MYOZ2Q9NPC6 264 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 GNL3LQ9NVN8 582 aaKnown RBP9.02□□□□□ -0.97
USP46-203ENST00000502443 NOP58Q9Y2X3 529 aaKnown RBP9.02□□□□□ -0.97
USP46-203ENST00000502443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.02□□□□□ -0.97
USP46-203ENST00000502443 ZNF609O15014 1411 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 FAM205AQ6ZU69 1335 aa9.02□□□□□ -0.97
USP46-203ENST00000502443 MYH13Q9UKX3 1938 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 HSPA6P17066 643 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 PHKA1P46020 1223 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 FKBP1AP62942 108 aaKnown RBP9.01□□□□□ -0.97
USP46-203ENST00000502443 GORABQ5T7V8 394 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 SIRT2Q8IXJ6 389 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 ZC3H15Q8WU90 426 aaKnown RBP9.01□□□□□ -0.97
USP46-203ENST00000502443 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 HDAC9Q9UKV0 1011 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 EXOC6BQ9Y2D4 811 aa9.01□□□□□ -0.97
USP46-203ENST00000502443 ARAP2Q8WZ64 1704 aa9□□□□□ -0.97
USP46-203ENST00000502443 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
USP46-203ENST00000502443 MMP14P50281 582 aa9□□□□□ -0.97
USP46-203ENST00000502443 SCARF1Q14162 830 aa9□□□□□ -0.97
USP46-203ENST00000502443 HSP90AB4PQ58FF6 505 aa9□□□□□ -0.97
USP46-203ENST00000502443 CCDC102BQ68D86 513 aa9□□□□□ -0.97
USP46-203ENST00000502443 ERC1Q8IUD2 1116 aa9□□□□□ -0.97
USP46-203ENST00000502443 TBC1D22AQ8WUA7 517 aa9□□□□□ -0.97
USP46-203ENST00000502443 DCPSQ96C86 337 aaKnown RBP9□□□□□ -0.97
USP46-203ENST00000502443 CRBNQ96SW2 442 aa9□□□□□ -0.97
USP46-203ENST00000502443 PGAP2Q9UHJ9 254 aa9□□□□□ -0.97
USP46-203ENST00000502443 SUPT16HQ9Y5B9 1047 aaKnown RBP9□□□□□ -0.97
USP46-203ENST00000502443 POLR2AP24928 1970 aaKnown RBP9□□□□□ -0.97
USP46-203ENST00000502443 APBB1O00213 710 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 APLP1P51693 650 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 RBM5P52756 815 aaKnown RBP eCLIP8.99□□□□□ -0.97
USP46-203ENST00000502443 NBPF9Q3BBW0 867 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 TNNI3KQ59H18 835 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 WDR66Q8TBY9 1149 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 BCL11AQ9H165 835 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 GPR108Q9NPR9 543 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 GGA3Q9NZ52 723 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 DENND2AQ9ULE3 1009 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 TTF2Q9UNY4 1162 aaKnown RBP8.99□□□□□ -0.97
USP46-203ENST00000502443 FPGT-TNNI3KV9GXZ4 949 aa8.99□□□□□ -0.97
USP46-203ENST00000502443 TRAF5O00463 557 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 WNT10BO00744 389 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 SEMA3EO15041 775 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 RASGRF1Q13972 1273 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 DLGAP5Q15398 846 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 GRIK5Q16478 980 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 ANGEL2Q5VTE6 544 aaKnown RBP8.98□□□□□ -0.97
USP46-203ENST00000502443 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 KRT26Q7Z3Y9 468 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 USP48Q86UV5 1035 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 RHPN1Q8TCX5 695 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 GLIS2Q9BZE0 524 aaPredicted RBP8.98□□□□□ -0.97
USP46-203ENST00000502443 ASTN2O75129 1339 aaPredicted RBP8.98□□□□□ -0.97
USP46-203ENST00000502443 PASKQ96RG2 1323 aa8.98□□□□□ -0.97
USP46-203ENST00000502443 COL1A1P02452 1464 aaPredicted RBP8.97□□□□□ -0.97
USP46-203ENST00000502443 RAB11FIP3O75154 756 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 HTRA3P83110 453 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 FMR1Q06787 632 aaKnown RBP eCLIP8.97□□□□□ -0.97
USP46-203ENST00000502443 CFAP100Q494V2 611 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 AACSQ86V21 672 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 SULF1Q8IWU6 871 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 CLASRPQ8N2M8 674 aaKnown RBP8.97□□□□□ -0.97
USP46-203ENST00000502443 EAF2Q96CJ1 260 aaPredicted RBP8.97□□□□□ -0.97
USP46-203ENST00000502443 KIF1BPQ96EK5 621 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 DBNDD2Q9BQY9 259 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 CCDC8Q9H0W5 538 aaPredicted RBP8.97□□□□□ -0.97
USP46-203ENST00000502443 IL1RAPL2Q9NP60 686 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 SERPINA10Q9UK55 444 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 SCAF8Q9UPN6 1271 aaKnown RBP8.97□□□□□ -0.97
USP46-203ENST00000502443 PCDHB15Q9Y5E8 787 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 PCDHAC2Q9Y5I4 1007 aa8.97□□□□□ -0.97
USP46-203ENST00000502443 TRPM7Q96QT4 1865 aa8.96□□□□□ -0.97
USP46-203ENST00000502443 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 TMEM88BA6NKF7 163 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 ADM5C9JUS6 153 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 MYO1BO43795 1136 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 LDHBP07195 334 aaKnown RBP8.96□□□□□ -0.98
USP46-203ENST00000502443 UQCRFS1P1P0C7P4 283 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 ARID4AP29374 1257 aaPredicted RBP8.96□□□□□ -0.98
USP46-203ENST00000502443 CRKP46108 304 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 TTC39AQ5SRH9 613 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 PI16Q6UXB8 463 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 DLK2Q6UY11 383 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 ZGPATQ8N5A5 531 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms