RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 TMCC1O94876 653 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 PHBP35232 272 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 DDX19AQ9NUU7 478 aaKnown RBP5.38□□□□□ -1.55
NEAT1-202ENST00000501122 FAM169AQ9Y6X4 670 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 CCDC69A6NI79 296 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 CASP10Q92851 521 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 SH3GL1Q99961 368 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 MYO1BO43795 1136 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 ARHGAP24Q8N264 748 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 HIC2Q96JB3 615 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 MRPS9P82933 396 aaKnown RBP5.38□□□□□ -1.55
NEAT1-202ENST00000501122 FAM81BQ96LP2 452 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 TXNDC9O14530 226 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 CC2D1AQ6P1N0 951 aaPredicted RBP5.38□□□□□ -1.55
NEAT1-202ENST00000501122 E7EVH7 732 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 MCF2LO15068 1137 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 KDM1AO60341 852 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 SUPT3HO75486 399 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 FBLN2P98095 1184 aa5.38□□□□□ -1.55
NEAT1-202ENST00000501122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.38□□□□□ -1.551e-33■□□□□ 10.9
NEAT1-202ENST00000501122 CCDC178Q5BJE1 867 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 APLFQ8IW19 511 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 KRT38O76015 456 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SLFNL1Q499Z3 407 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 TEX9Q8N6V9 391 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 RRP36Q96EU6 259 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 NKIRAS1Q9NYS0 192 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 U2AF1L5P0DN76 240 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 U2AF1Q01081 240 aaKnown RBP eCLIP5.37□□□□□ -1.551e-30■■■■■ 32.2
NEAT1-202ENST00000501122 HEATR3Q7Z4Q2 680 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SMG6Q86US8 1419 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 KRT72Q14CN4 511 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 ADAM21Q9UKJ8 722 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 LSM1O15116 133 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 HPDP32754 393 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CYP2C19P33261 490 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CTNNA3Q9UI47 895 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CETN2P41208 172 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SIKE1Q9BRV8 207 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 METTL14Q9HCE5 456 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 FBXO9Q9UK97 447 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 RSPH3Q86UC2 560 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SH3GL2Q99962 352 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 RHBDL2Q9NX52 303 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SEL1LQ9UBV2 794 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 GSTTP1A0A1W2PQM5 241 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 HNRNPH1P31943 449 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 VSIG1Q86XK7 387 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CEP70Q8NHQ1 597 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SYTL4Q96C24 671 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 PAPOLBQ9NRJ5 636 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 GOLGA4Q13439 2230 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CPLX3Q8WVH0 158 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CARD8Q9Y2G2 431 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CHRM1P11229 460 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 RAB3GAP1Q15042 981 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 TMA7Q9Y2S6 64 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 WDR46O15213 610 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 TMEM232C9JQI7 657 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 PALM2Q8IXS6 379 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 MCUR1Q96AQ8 359 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 KCNK9Q9NPC2 374 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SLFN14P0C7P3 912 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 CCT6AP40227 531 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 SEPT2Q15019 361 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 FAM81AQ8TBF8 368 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 MPHOSPH8Q99549 860 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 PECAM1P16284 738 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 NR1H4Q96RI1 486 aaPredicted RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 UTP14AQ9BVJ6 771 aaKnown RBP5.37□□□□□ -1.55
NEAT1-202ENST00000501122 GMEB1Q9Y692 573 aa5.37□□□□□ -1.55
NEAT1-202ENST00000501122 AP1G2O75843 785 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 PRR29P0C7W0 189 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 BAG2O95816 211 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 UBASH3AP57075 661 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ANKRD1Q15327 319 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 APBB1IPQ7Z5R6 666 aaPredicted RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 SNX21Q969T3 373 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ATP6V1E2Q96A05 226 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 CYP46A1Q9Y6A2 500 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 PNMA6AP0CW24 399 aaPredicted RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 TUBA1BP68363 451 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 TUBA1AQ71U36 451 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 RABGGTAQ92696 567 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 CCDC77Q9BR77 488 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 OATP04181 439 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 FLOT1O75955 427 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 NFE2L2Q16236 605 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 TFIP11Q9UBB9 837 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 GOLGA8QA0A0J9YX86 632 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 GOLGA8OA6NCC3 632 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 GOLGA8NF8WBI6 632 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 YY1P25490 414 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 USP48Q86UV5 1035 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 PAX7P23759 505 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 EMC3Q9P0I2 261 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 CEP126Q9P2H0 1117 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 CCDC189A1A4V9 331 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 KLC1Q07866 573 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 FKBP15Q5T1M5 1219 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms