RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, human

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTN-208	ENST00000498223	MYH7	P12883	1935 aa		14	□□□□□ -0.17
CTTN-208	ENST00000498223	DPY19L2	Q6NUT2	758 aa		13.99	□□□□□ -0.17
CTTN-208	ENST00000498223	PODN	Q7Z5L7	613 aa		13.99	□□□□□ -0.17
CTTN-208	ENST00000498223	ZNRF3	Q9ULT6	936 aa		13.99	□□□□□ -0.17
CTTN-208	ENST00000498223	COL4A5	P29400	1685 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	IRS2	Q9Y4H2	1338 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	RAD17	O75943	681 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	MX1	P20591	662 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	GTF2I	P78347	998 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	CIAPIN1	Q6FI81	312 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	ECHDC1	Q9NTX5	307 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	DENND2A	Q9ULE3	1009 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	JAG2	Q9Y219	1238 aa		13.98	□□□□□ -0.17
CTTN-208	ENST00000498223	YDJC	A8MPS7	323 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	ERC2	O15083	957 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	IL1R1	P14778	569 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	TNIP1	Q15025	636 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	TTLL5	Q6EMB2	1281 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	DNAJC5G	Q8N7S2	189 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	TDRD7	Q8NHU6	1098 aa	Known RBP	13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	SNRK	Q9NRH2	765 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	GJA3	Q9Y6H8	435 aa		13.97	□□□□□ -0.17
CTTN-208	ENST00000498223	MYH2	Q9UKX2	1941 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	USP17L3	A6NCW0	530 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	USP17L4	A6NCW7	530 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	SEMA3E	O15041	775 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	TSHZ3	Q63HK5	1081 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	USP17L1	Q7RTZ2	530 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	DNAJC2	Q99543	621 aa	Known RBP	13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	BOLA2	Q9H3K6	86 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	KCNQ5	Q9NR82	932 aa		13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	ZNF646	O15015	1829 aa	Predicted RBP	13.96	□□□□□ -0.17
CTTN-208	ENST00000498223	TTC41P	Q6P2S7	1318 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	FZD9	O00144	591 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	PSMD14	O00487	310 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	ATP5J	P18859	108 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	ARID4A	P29374	1257 aa	Predicted RBP	13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	RGS3	P49796	1198 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	CXCL9	Q07325	125 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	RASGRF1	Q13972	1273 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	SPATA5	Q8NB90	893 aa		13.95	□□□□□ -0.18
CTTN-208	ENST00000498223	ZNF541	Q9H0D2	1346 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	POTEC	B2RU33	542 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	PDE4A	P27815	886 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	MCAM	P43121	646 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	PDE1A	P54750	535 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	SCARF1	Q14162	830 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	STRIP1	Q5VSL9	837 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	PI16	Q6UXB8	463 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	PLEKHM2	Q8IWE5	1019 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	WDR66	Q8TBY9	1149 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	HMG20B	Q9P0W2	317 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	ABCF2	Q9UG63	623 aa		13.94	□□□□□ -0.18
CTTN-208	ENST00000498223	GLRX3	O76003	335 aa	Known RBP	13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	MAP4K4	O95819	1239 aa	Predicted RBP	13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	ZAP70	P43403	619 aa		13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	MFSD14B	Q5SR56	506 aa		13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	ZGPAT	Q8N5A5	531 aa	Known RBP	13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	TBC1D22A	Q8WUA7	517 aa		13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	WDR90	Q96KV7	1748 aa		13.93	□□□□□ -0.18
CTTN-208	ENST00000498223	FAM205A	Q6ZU69	1335 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	DOCK2	Q92608	1830 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223		F8W031	263 aa	Predicted RBP	13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	GOLIM4	O00461	696 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	DDN	O94850	711 aa	Predicted RBP	13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	HTRA3	P83110	453 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	SKAP1	Q86WV1	359 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	KLRG1	Q96E93	195 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	MXD3	Q9BW11	206 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	LRP2BP	Q9P2M1	347 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	STAP2	Q9UGK3	403 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	NDUFB9	Q9Y6M9	179 aa		13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	COL1A1	P02452	1464 aa	Predicted RBP	13.92	□□□□□ -0.18
CTTN-208	ENST00000498223	AOX1	Q06278	1338 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	TRIM6-TRIM34	B2RNG4	842 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	VIL1	P09327	827 aa	Known RBP	13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	TTF1	Q15361	905 aa	Predicted RBP	13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	DACT2	Q5SW24	774 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	TBC1D9	Q6ZT07	1266 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	ERICH6	Q7L0X2	663 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	GPC2	Q8N158	579 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	HAUS7	Q99871	368 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	RAI14	Q9P0K7	980 aa		13.91	□□□□□ -0.18
CTTN-208	ENST00000498223	PDS5A	Q29RF7	1337 aa	Known RBP	13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	MYO3B	Q8WXR4	1341 aa		13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	SALL3	Q9BXA9	1300 aa		13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	SCN4A	P35499	1836 aa		13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	IQCA1L	A6NCM1	817 aa		13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	IDH1	O75874	414 aa	Known RBP	13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	LDHB	P07195	334 aa	Known RBP	13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	LMOD1	P29536	600 aa	Predicted RBP	13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	GMPS	P49915	693 aa	Predicted RBP	13.9	□□□□□ -0.18
CTTN-208	ENST00000498223	DZIP1	Q86YF9	867 aa	Known RBP	13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms