RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 TICAM2Q86XR7 235 aa21.4■■□□□ 1.02
CTDSP1-215ENST00000498160 C16orf71Q8IYS4 520 aaPredicted RBP21.4■■□□□ 1.02
CTDSP1-215ENST00000498160 SPATA5Q8NB90 893 aa21.4■■□□□ 1.02
CTDSP1-215ENST00000498160 DBNDD1Q9H9R9 158 aa21.4■■□□□ 1.02
CTDSP1-215ENST00000498160 RNF181Q9P0P0 153 aa21.4■■□□□ 1.02
CTDSP1-215ENST00000498160 CCDC88AQ3V6T2 1871 aa21.4■■□□□ 1.02
CTDSP1-215ENST00000498160 SALL1Q9NSC2 1324 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 USP17L3A6NCW0 530 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 USP17L4A6NCW7 530 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 FZD9O00144 591 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 MMP14P50281 582 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 SUGT1Q9Y2Z0 365 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 PSME4Q14997 1843 aa21.39■■□□□ 1.01
CTDSP1-215ENST00000498160 RASGRF1Q13972 1273 aa21.38■■□□□ 1.01
CTDSP1-215ENST00000498160 LRRFIP1Q32MZ4 808 aaKnown RBP21.38■■□□□ 1.01
CTDSP1-215ENST00000498160 C9orf131Q5VYM1 1079 aa21.38■■□□□ 1.01
CTDSP1-215ENST00000498160 SPTY2D1Q68D10 685 aaPredicted RBP21.38■■□□□ 1.01
CTDSP1-215ENST00000498160 HAUS7Q99871 368 aa21.38■■□□□ 1.01
CTDSP1-215ENST00000498160 PDE4AP27815 886 aa21.37■■□□□ 1.01
CTDSP1-215ENST00000498160 MCAMP43121 646 aa21.37■■□□□ 1.01
CTDSP1-215ENST00000498160 TTLL5Q6EMB2 1281 aa21.37■■□□□ 1.01
CTDSP1-215ENST00000498160 CIAPIN1Q6FI81 312 aa21.37■■□□□ 1.01
CTDSP1-215ENST00000498160 PI4K2BQ8TCG2 481 aa21.37■■□□□ 1.01
CTDSP1-215ENST00000498160 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
CTDSP1-215ENST00000498160 TIAM2Q8IVF5 1701 aa21.37■■□□□ 1.01
CTDSP1-215ENST00000498160 OTUD7AQ8TE49 926 aaPredicted RBP21.36■■□□□ 1.01
CTDSP1-215ENST00000498160 MAST3O60307 1309 aa21.35■■□□□ 1.01
CTDSP1-215ENST00000498160 RPS12P25398 132 aaKnown RBP21.35■■□□□ 1.01
CTDSP1-215ENST00000498160 GTF2IP78347 998 aa21.35■■□□□ 1.01
CTDSP1-215ENST00000498160 BOLA2Q9H3K6 86 aa21.35■■□□□ 1.01
CTDSP1-215ENST00000498160 COL4A5P29400 1685 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 AKAP11Q9UKA4 1901 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 YDJCA8MPS7 323 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 PRELPP51888 382 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 CHAF1AQ13111 956 aaPredicted RBP21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 DPY19L2Q6NUT2 758 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 CNTROBQ8N137 903 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 AGBL3Q8NEM8 1001 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 PAG1Q9NWQ8 432 aa21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 IQSEC3Q9UPP2 1182 aaPredicted RBP21.34■■□□□ 1.01
CTDSP1-215ENST00000498160 VIL1P09327 827 aaKnown RBP21.33■■□□□ 1.01
CTDSP1-215ENST00000498160 MFSD14BQ5SR56 506 aa21.33■■□□□ 1.01
CTDSP1-215ENST00000498160 TTC22Q5TAA0 569 aa21.33■■□□□ 1.01
CTDSP1-215ENST00000498160 FBXW7Q969H0 707 aa21.33■■□□□ 1.01
CTDSP1-215ENST00000498160 EVI5LQ96CN4 794 aa21.33■■□□□ 1.01
CTDSP1-215ENST00000498160 DNAJC2Q99543 621 aaKnown RBP21.33■■□□□ 1.01
CTDSP1-215ENST00000498160 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.33■■□□□ 1.01
CTDSP1-215ENST00000498160 ZAP70P43403 619 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 RGS3P49796 1198 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 CXCL9Q07325 125 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 DACT2Q5SW24 774 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 RSBN1LQ6PCB5 846 aaPredicted RBP21.32■■□□□ 1
CTDSP1-215ENST00000498160 SLF2Q8IX21 1173 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 GPC2Q8N158 579 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 RFX7Q2KHR2 1363 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 SRCAPQ6ZRS2 3230 aa21.32■■□□□ 1
CTDSP1-215ENST00000498160 COL1A1P02452 1464 aaPredicted RBP21.32■■□□□ 1
CTDSP1-215ENST00000498160 SCN9AQ15858 1988 aa21.31■■□□□ 1
CTDSP1-215ENST00000498160 MAP3K12Q12852 859 aa21.31■■□□□ 1
CTDSP1-215ENST00000498160 SCARF1Q14162 830 aa21.31■■□□□ 1
CTDSP1-215ENST00000498160 ERICH6Q7L0X2 663 aa21.31■■□□□ 1
CTDSP1-215ENST00000498160 PSMD14O00487 310 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 RAD17O75943 681 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 LDHBP07195 334 aaKnown RBP21.3■■□□□ 1
CTDSP1-215ENST00000498160 BMP2KLQ5H9B9 411 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 TSHZ3Q63HK5 1081 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 DPF2Q92785 391 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 SNRKQ9NRH2 765 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 LRP2BPQ9P2M1 347 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 HDAC9Q9UKV0 1011 aa21.3■■□□□ 1
CTDSP1-215ENST00000498160 GOLIM4O00461 696 aa21.29■■□□□ 1
CTDSP1-215ENST00000498160 CYP2E1P05181 493 aaPredicted RBP21.29■■□□□ 1
CTDSP1-215ENST00000498160 ZFYP08048 801 aaPredicted RBP21.29■■□□□ 1
CTDSP1-215ENST00000498160 GSTO1P78417 241 aa21.29■■□□□ 1
CTDSP1-215ENST00000498160 KBTBD3Q8NAB2 608 aa21.29■■□□□ 1
CTDSP1-215ENST00000498160 ABCF2Q9UG63 623 aa21.29■■□□□ 1
CTDSP1-215ENST00000498160 MAST2Q6P0Q8 1798 aa21.28■■□□□ 1
CTDSP1-215ENST00000498160 ZNF646O15015 1829 aaPredicted RBP21.28■■□□□ 1
CTDSP1-215ENST00000498160 DOCK2Q92608 1830 aa21.28■■□□□ 1
CTDSP1-215ENST00000498160 TRIM6-TRIM34B2RNG4 842 aa21.28■■□□□ 1
CTDSP1-215ENST00000498160 HIP1O00291 1037 aa21.28■■□□□ 1
CTDSP1-215ENST00000498160 HDLBPQ00341 1268 aaKnown RBP21.28■■□□□ 1
CTDSP1-215ENST00000498160 PI16Q6UXB8 463 aa21.28■■□□□ 1
CTDSP1-215ENST00000498160 OGFOD1Q8N543 542 aa21.28■■□□□ 1
CTDSP1-215ENST00000498160 MRIQ9BWK5 157 aa21.28■■□□□ 1
CTDSP1-215ENST00000498160 LDHCP07864 332 aa21.27■■□□□ 1
CTDSP1-215ENST00000498160 DZIP1Q86YF9 867 aaKnown RBP21.27■■□□□ 1
CTDSP1-215ENST00000498160 CERS3Q8IU89 383 aa21.27■■□□□ 1
CTDSP1-215ENST00000498160 ZNF541Q9H0D2 1346 aa21.27■□□□□ 0.99
CTDSP1-215ENST00000498160 FSD1Q9BTV5 496 aa21.26■□□□□ 0.99
CTDSP1-215ENST00000498160 RAI14Q9P0K7 980 aa21.26■□□□□ 0.99
CTDSP1-215ENST00000498160 GLTPD2A6NH11 291 aa21.25■□□□□ 0.99
CTDSP1-215ENST00000498160 IDH1O75874 414 aaKnown RBP21.25■□□□□ 0.99
CTDSP1-215ENST00000498160 LMOD1P29536 600 aaPredicted RBP21.25■□□□□ 0.99
CTDSP1-215ENST00000498160 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
CTDSP1-215ENST00000498160 GMLQ99445 158 aa21.25■□□□□ 0.99
CTDSP1-215ENST00000498160 KCNQ5Q9NR82 932 aa21.25■□□□□ 0.99
CTDSP1-215ENST00000498160 GJA3Q9Y6H8 435 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms