RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 RBM8AQ9Y5S9 174 aaKnown RBP6.64□□□□□ -1.35
PHC3-217ENST00000497658 PEAK1Q9H792 1746 aa6.64□□□□□ -1.35
PHC3-217ENST00000497658 ACEP12821 1306 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 PRR36Q9H6K5 1346 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 METP08581 1390 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 BECN2A8MW95 431 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 CCP110O43303 1012 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 ATP8B1O43520 1251 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 IFIT2P09913 472 aaKnown RBP6.63□□□□□ -1.35
PHC3-217ENST00000497658 CPA1P15085 419 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 OS9Q13438 667 aaPredicted RBP6.63□□□□□ -1.35
PHC3-217ENST00000497658 CCDC144BQ3MJ40 725 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 FERMT3Q86UX7 667 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 CCDC144CPQ8IYA2 1237 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 CCAR2Q8N163 923 aaKnown RBP6.63□□□□□ -1.35
PHC3-217ENST00000497658 NECAB1Q8N987 351 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 ZNF592Q92610 1267 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 DNAJC2Q99543 621 aaKnown RBP6.63□□□□□ -1.35
PHC3-217ENST00000497658 OSBPL5Q9H0X9 879 aaPredicted RBP6.63□□□□□ -1.35
PHC3-217ENST00000497658 TMEM51Q9NW97 253 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 CHMP3Q9Y3E7 222 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 NRXN3Q9Y4C0 1643 aa6.63□□□□□ -1.35
PHC3-217ENST00000497658 PTPRUQ92729 1446 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 SLC27A2O14975 620 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 IGSF3O75054 1194 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 NBPF7P0C2Y1 421 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 H2AFXP16104 143 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 CDK11BP21127 795 aaKnown RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 BEND3Q5T5X7 828 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 FBXO38Q6PIJ6 1188 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 LARP1Q6PKG0 1096 aaKnown RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 CRIPAKQ8N1N5 446 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 DNAAF4Q8WXU2 420 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 PGBD1Q96JS3 809 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 LLPHQ9BRT6 129 aaKnown RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 NPDC1Q9NQX5 325 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 ARIH1Q9Y4X5 557 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 AGLP35573 1532 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 CCDC69A6NI79 296 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 ALDH1L1O75891 902 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 TPM1P09493 284 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 GTF2E1P29083 439 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 CCZ1BP86790 482 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 CCZ1P86791 482 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 NAA16Q6N069 864 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 CEP57L1Q8IYX8 460 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 CCDC150Q8NCX0 1101 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 GTF3C6Q969F1 213 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 NOL10Q9BSC4 688 aaKnown RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 ARGLU1Q9NWB6 273 aaPredicted RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 TFIP11Q9UBB9 837 aaKnown RBP6.62□□□□□ -1.35
PHC3-217ENST00000497658 RCOR1Q9UKL0 485 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 JCADQ9P266 1359 aa6.62□□□□□ -1.35
PHC3-217ENST00000497658 TOPAZ1Q8N9V7 1692 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 FMN2Q9NZ56 1722 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 H3BQV1 296 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 TULP2O00295 520 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 WIPF1O43516 503 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 KINO60870 393 aaKnown RBP6.61□□□□□ -1.35
PHC3-217ENST00000497658 CYP2C19P33261 490 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 RESTQ13127 1097 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 TOB2Q14106 344 aaPredicted RBP6.61□□□□□ -1.35
PHC3-217ENST00000497658 NAA30Q147X3 362 aaPredicted RBP6.61□□□□□ -1.35
PHC3-217ENST00000497658 ELF2Q15723 593 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 TEX35Q5T0J7 233 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 FAM173BQ6P4H8 233 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 CCDC73Q6ZRK6 1079 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 FILIP1Q7Z7B0 1213 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 BPIFA3Q9BQP9 254 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 DIP2AQ14689 1571 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 HMGB1P09429 215 aaKnown RBP6.61□□□□□ -1.35
PHC3-217ENST00000497658 AMPHP49418 695 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 TPM4P67936 248 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 FAM160A1Q05DH4 1040 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 SNW1Q13573 536 aaKnown RBP6.61□□□□□ -1.35
PHC3-217ENST00000497658 CCDC93Q567U6 631 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 TICAM2Q86XR7 235 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 IL17REQ8NFR9 667 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 ZNF396Q96N95 335 aaPredicted RBP6.61□□□□□ -1.35
PHC3-217ENST00000497658 PHAXQ9H814 394 aaKnown RBP6.61□□□□□ -1.35
PHC3-217ENST00000497658 DACH1Q9UI36 760 aa6.61□□□□□ -1.35
PHC3-217ENST00000497658 MED23Q9ULK4 1368 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 NPHP4O75161 1426 aaPredicted RBP6.6□□□□□ -1.35
PHC3-217ENST00000497658 PI4KAP2A4QPH2 592 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 NFX1Q12986 1120 aaKnown RBP6.6□□□□□ -1.35
PHC3-217ENST00000497658 NMIQ13287 307 aaPredicted RBP6.6□□□□□ -1.35
PHC3-217ENST00000497658 LMOD2Q6P5Q4 547 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 DHX40Q8IX18 779 aaKnown RBP6.6□□□□□ -1.35
PHC3-217ENST00000497658 PI4KAP1Q8N8J0 262 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 SMARCC2Q8TAQ2 1214 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 PKD2L1Q9P0L9 805 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 V9GYY5 206 aaPredicted RBP6.6□□□□□ -1.35
PHC3-217ENST00000497658 ADCY9O60503 1353 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 RFX7Q2KHR2 1363 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 CEMIPQ8WUJ3 1361 aa6.6□□□□□ -1.35
PHC3-217ENST00000497658 CEP170BQ9Y4F5 1589 aaPredicted RBP6.6□□□□□ -1.35
PHC3-217ENST00000497658 ACTN4O43707 911 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms