RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 WWC3Q9ULE0 1092 aa24.05■■□□□ 1.44
SCAMP3-209ENST00000497470 DICER1Q9UPY3 1922 aaKnown RBP24.05■■□□□ 1.44
SCAMP3-209ENST00000497470 SBF1O95248 1867 aa24.04■■□□□ 1.44
SCAMP3-209ENST00000497470 BMP2KLQ5H9B9 411 aa24.03■■□□□ 1.44
SCAMP3-209ENST00000497470 PELP1Q8IZL8 1130 aaKnown RBP24.03■■□□□ 1.44
SCAMP3-209ENST00000497470 GPR101Q96P66 508 aaPredicted RBP24.03■■□□□ 1.44
SCAMP3-209ENST00000497470 AKAP11Q9UKA4 1901 aa24.03■■□□□ 1.44
SCAMP3-209ENST00000497470 MYO3BQ8WXR4 1341 aa24.03■■□□□ 1.44
SCAMP3-209ENST00000497470 USP17L3A6NCW0 530 aa24.02■■□□□ 1.44
SCAMP3-209ENST00000497470 USP17L4A6NCW7 530 aa24.02■■□□□ 1.44
SCAMP3-209ENST00000497470 FRAT2O75474 233 aaPredicted RBP24.02■■□□□ 1.44
SCAMP3-209ENST00000497470 RASSF7Q02833 373 aa24.02■■□□□ 1.44
SCAMP3-209ENST00000497470 TTC22Q5TAA0 569 aa24.02■■□□□ 1.44
SCAMP3-209ENST00000497470 USP17L1Q7RTZ2 530 aa24.02■■□□□ 1.44
SCAMP3-209ENST00000497470 PRELPP51888 382 aa24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 TNIP1Q15025 636 aa24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 LRRFIP1Q32MZ4 808 aaKnown RBP24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 SPTY2D1Q68D10 685 aaPredicted RBP24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 TTLL5Q6EMB2 1281 aa24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 EVI5LQ96CN4 794 aa24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 MRIQ9BWK5 157 aa24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 DBNDD1Q9H9R9 158 aa24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 RFX7Q2KHR2 1363 aa24.01■■□□□ 1.43
SCAMP3-209ENST00000497470 PSME4Q14997 1843 aa24■■□□□ 1.43
SCAMP3-209ENST00000497470 VIL1P09327 827 aaKnown RBP24■■□□□ 1.43
SCAMP3-209ENST00000497470 SCARF1Q14162 830 aa24■■□□□ 1.43
SCAMP3-209ENST00000497470 DOK7Q18PE1 504 aa24■■□□□ 1.43
SCAMP3-209ENST00000497470 BOLA2Q9H3K6 86 aa24■■□□□ 1.43
SCAMP3-209ENST00000497470 PAG1Q9NWQ8 432 aa24■■□□□ 1.43
SCAMP3-209ENST00000497470 CHD4Q14839 1912 aa24■■□□□ 1.43
SCAMP3-209ENST00000497470 YDJCA8MPS7 323 aa23.99■■□□□ 1.43
SCAMP3-209ENST00000497470 EIF6P56537 245 aaKnown RBP23.99■■□□□ 1.43
SCAMP3-209ENST00000497470 COL4A5P29400 1685 aa23.99■■□□□ 1.43
SCAMP3-209ENST00000497470 CYP2E1P05181 493 aaPredicted RBP23.98■■□□□ 1.43
SCAMP3-209ENST00000497470 RPS12P25398 132 aaKnown RBP23.98■■□□□ 1.43
SCAMP3-209ENST00000497470 ZAP70P43403 619 aa23.98■■□□□ 1.43
SCAMP3-209ENST00000497470 CNTROBQ8N137 903 aa23.98■■□□□ 1.43
SCAMP3-209ENST00000497470 AGBL3Q8NEM8 1001 aa23.98■■□□□ 1.43
SCAMP3-209ENST00000497470 COL1A1P02452 1464 aaPredicted RBP23.97■■□□□ 1.43
SCAMP3-209ENST00000497470 DACT2Q5SW24 774 aa23.97■■□□□ 1.43
SCAMP3-209ENST00000497470 CIAPIN1Q6FI81 312 aa23.97■■□□□ 1.43
SCAMP3-209ENST00000497470 KBTBD3Q8NAB2 608 aa23.97■■□□□ 1.43
SCAMP3-209ENST00000497470 MYH13Q9UKX3 1938 aa23.97■■□□□ 1.43
SCAMP3-209ENST00000497470 GTF2IP78347 998 aa23.96■■□□□ 1.43
SCAMP3-209ENST00000497470 HDLBPQ00341 1268 aaKnown RBP23.96■■□□□ 1.43
SCAMP3-209ENST00000497470 CXCL9Q07325 125 aa23.96■■□□□ 1.43
SCAMP3-209ENST00000497470 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
SCAMP3-209ENST00000497470 RNF181Q9P0P0 153 aa23.96■■□□□ 1.43
SCAMP3-209ENST00000497470 CCDC88AQ3V6T2 1871 aa23.96■■□□□ 1.43
SCAMP3-209ENST00000497470 MAST3O60307 1309 aa23.95■■□□□ 1.42
SCAMP3-209ENST00000497470 ZFYP08048 801 aaPredicted RBP23.95■■□□□ 1.42
SCAMP3-209ENST00000497470 RGS3P49796 1198 aa23.95■■□□□ 1.42
SCAMP3-209ENST00000497470 ZSCAN25Q6NSZ9 544 aa23.95■■□□□ 1.42
SCAMP3-209ENST00000497470 DPF2Q92785 391 aa23.95■■□□□ 1.42
SCAMP3-209ENST00000497470 GSPT1P15170 499 aaKnown RBP23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 MAP3K12Q12852 859 aa23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 MFSD14BQ5SR56 506 aa23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 TSHZ3Q63HK5 1081 aa23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 RSBN1LQ6PCB5 846 aaPredicted RBP23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 GPC2Q8N158 579 aa23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 GMLQ99445 158 aa23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 SRCAPQ6ZRS2 3230 aa23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 SCN9AQ15858 1988 aa23.94■■□□□ 1.42
SCAMP3-209ENST00000497470 HIP1O00291 1037 aa23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 ERICH6Q7L0X2 663 aa23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 SLF2Q8IX21 1173 aa23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 FAM163AQ96GL9 167 aaPredicted RBP23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 DNAJC2Q99543 621 aaKnown RBP23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 BCL11AQ9H165 835 aa23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 IQSEC3Q9UPP2 1182 aaPredicted RBP23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 ZNF646O15015 1829 aaPredicted RBP23.93■■□□□ 1.42
SCAMP3-209ENST00000497470 GOLIM4O00461 696 aa23.92■■□□□ 1.42
SCAMP3-209ENST00000497470 CERS3Q8IU89 383 aa23.92■■□□□ 1.42
SCAMP3-209ENST00000497470 SNRKQ9NRH2 765 aa23.92■■□□□ 1.42
SCAMP3-209ENST00000497470 DOCK2Q92608 1830 aa23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 PSMD14O00487 310 aa23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 LDHBP07195 334 aaKnown RBP23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 SDSP20132 328 aa23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 CHAF1AQ13111 956 aaPredicted RBP23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 UBE3CQ15386 1083 aa23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 DPY19L2Q6NUT2 758 aa23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 PI16Q6UXB8 463 aa23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 LRP2BPQ9P2M1 347 aa23.91■■□□□ 1.42
SCAMP3-209ENST00000497470 GSTO1P78417 241 aa23.9■■□□□ 1.42
SCAMP3-209ENST00000497470 KCNQ5Q9NR82 932 aa23.9■■□□□ 1.42
SCAMP3-209ENST00000497470 TRIM6-TRIM34B2RNG4 842 aa23.89■■□□□ 1.41
SCAMP3-209ENST00000497470 MAP4K4O95819 1239 aaPredicted RBP23.89■■□□□ 1.41
SCAMP3-209ENST00000497470 LDHCP07864 332 aa23.89■■□□□ 1.41
SCAMP3-209ENST00000497470 HHIPL2Q6UWX4 724 aa23.89■■□□□ 1.41
SCAMP3-209ENST00000497470 CERS5Q8N5B7 392 aa23.89■■□□□ 1.41
SCAMP3-209ENST00000497470 ANTXR1Q9H6X2 564 aa23.89■■□□□ 1.41
SCAMP3-209ENST00000497470 PIH1D3Q9NQM4 214 aaKnown RBP23.89■■□□□ 1.41
SCAMP3-209ENST00000497470 RAD17O75943 681 aa23.88■■□□□ 1.41
SCAMP3-209ENST00000497470 NSUN4Q96CB9 384 aaKnown RBP23.88■■□□□ 1.41
SCAMP3-209ENST00000497470 ABCF2Q9UG63 623 aa23.88■■□□□ 1.41
SCAMP3-209ENST00000497470 SERPINA10Q9UK55 444 aa23.88■■□□□ 1.41
SCAMP3-209ENST00000497470 EIF5BO60841 1220 aaKnown RBP23.87■■□□□ 1.41
SCAMP3-209ENST00000497470 MTMR14Q8NCE2 650 aa23.87■■□□□ 1.41
SCAMP3-209ENST00000497470 L3MBTL3Q96JM7 780 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms