RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 C20orf204Q6ZNR8 217 aa7.37□□□□□ -1.23
CSMD3-208ENST00000497026 CCDC82Q8N4S0 544 aa7.37□□□□□ -1.23
CSMD3-208ENST00000497026 JPH1Q9HDC5 661 aaPredicted RBP7.37□□□□□ -1.23
CSMD3-208ENST00000497026 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
CSMD3-208ENST00000497026 ANKRD30AQ9BXX3 1397 aa7.37□□□□□ -1.23
CSMD3-208ENST00000497026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.37□□□□□ -1.23
CSMD3-208ENST00000497026 CEP170BQ9Y4F5 1589 aaPredicted RBP7.37□□□□□ -1.23
CSMD3-208ENST00000497026 CPB1P15086 417 aa7.36□□□□□ -1.23
CSMD3-208ENST00000497026 PSAPL1Q6NUJ1 521 aa7.36□□□□□ -1.23
CSMD3-208ENST00000497026 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
CSMD3-208ENST00000497026 RRP7BPQ9NSQ0 103 aa7.36□□□□□ -1.23
CSMD3-208ENST00000497026 SPATA31D1Q6ZQQ2 1576 aa7.36□□□□□ -1.23
CSMD3-208ENST00000497026 LILRB5O75023 590 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 RARAP10276 462 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 NID1P14543 1247 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 TRAPPC3LQ5T215 181 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 C16orf46Q6P387 395 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 HFE2Q6ZVN8 426 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 C1orf115Q9H7X2 142 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 LMTK2Q8IWU2 1503 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 ZBTB42B2RXF5 422 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 SPATA31C1P0DKV0 1188 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 SCNN1AP37088 669 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 PLAURQ03405 335 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 GRIK4Q16099 956 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 PRRT3Q5FWE3 981 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 ZMYM1Q5SVZ6 1142 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 DHX32Q7L7V1 743 aaKnown RBP7.35□□□□□ -1.23
CSMD3-208ENST00000497026 C14orf37Q86TY3 774 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 FAM35AQ86V20 835 aa7.35□□□□□ -1.23
CSMD3-208ENST00000497026 UNC13BO14795 1591 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 ROCK1Q13464 1354 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 ANKRD50Q9ULJ7 1429 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 ERVK-7P63135 1459 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 TNFRSF10BO14763 440 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 XYLBO75191 536 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
CSMD3-208ENST00000497026 CLP1Q92989 425 aaKnown RBP7.34□□□□□ -1.23
CSMD3-208ENST00000497026 PRDM6Q9NQX0 595 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
CSMD3-208ENST00000497026 CFAP65Q6ZU64 1925 aaKnown RBP7.34□□□□□ -1.23
CSMD3-208ENST00000497026 WASHC2CQ9Y4E1 1318 aa7.34□□□□□ -1.24
CSMD3-208ENST00000497026 EFCAB6Q5THR3 1501 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 GCC2Q8IWJ2 1684 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 SPDYE3A6NKU9 549 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 RGS9O75916 674 aaPredicted RBP7.33□□□□□ -1.24
CSMD3-208ENST00000497026 MAP3K6O95382 1288 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 ATP2B4P23634 1241 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
CSMD3-208ENST00000497026 DOC2BQ14184 412 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 KCNMB2Q9Y691 235 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 TNRQ92752 1358 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 ARHGAP31Q2M1Z3 1444 aa7.33□□□□□ -1.24
CSMD3-208ENST00000497026 A2ML1A8K2U0 1454 aa7.32□□□□□ -1.24
CSMD3-208ENST00000497026 ZBTB39O15060 712 aa7.32□□□□□ -1.24
CSMD3-208ENST00000497026 AFF1P51825 1210 aaKnown RBP7.32□□□□□ -1.24
CSMD3-208ENST00000497026 PERM1Q5SV97 790 aa7.32□□□□□ -1.24
CSMD3-208ENST00000497026 DMRTC2Q8IXT2 367 aaPredicted RBP7.32□□□□□ -1.24
CSMD3-208ENST00000497026 EFCC1Q9HA90 598 aa7.32□□□□□ -1.24
CSMD3-208ENST00000497026 PLA2R1Q13018 1463 aa7.32□□□□□ -1.24
CSMD3-208ENST00000497026 TET3O43151 1660 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 UBR1Q8IWV7 1749 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 CARNS1A5YM72 827 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 J3QW42 95 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 APBA3O96018 575 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 TRIP4Q15650 581 aaPredicted RBP7.31□□□□□ -1.24
CSMD3-208ENST00000497026 ELMSAN1Q6PJG2 1045 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 NLRP1Q9C000 1473 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 SYNMO15061 1565 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 NEURL4Q96JN8 1562 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 IQGAP3Q86VI3 1631 aa7.31□□□□□ -1.24
CSMD3-208ENST00000497026 POLR1AO95602 1720 aaPredicted RBP7.31□□□□□ -1.24
CSMD3-208ENST00000497026 E9PCH4 1651 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 MMP20O60882 483 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 ITGAEP38570 1179 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 GPR152Q8TDT2 470 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 COL26A1Q96A83 441 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 NSUN5Q96P11 429 aaKnown RBP7.3□□□□□ -1.24
CSMD3-208ENST00000497026 LPIN3Q9BQK8 851 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 SEMA6BQ9H3T3 888 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 UGGT1Q9NYU2 1555 aa7.3□□□□□ -1.24
CSMD3-208ENST00000497026 PIK3C2BO00750 1634 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 A0A0A0MRY4 1105 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 PTCD1O75127 700 aaKnown RBP7.29□□□□□ -1.24
CSMD3-208ENST00000497026 EIF2AK2P19525 551 aaKnown RBP7.29□□□□□ -1.24
CSMD3-208ENST00000497026 GATA4P43694 442 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 SHISA2Q6UWI4 295 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 TRPM4Q8TD43 1214 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 SMG9Q9H0W8 520 aaKnown RBP7.29□□□□□ -1.24
CSMD3-208ENST00000497026 TLR7Q9NYK1 1049 aaKnown RBP7.29□□□□□ -1.24
CSMD3-208ENST00000497026 PTPRTO14522 1441 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 NOS1P29475 1434 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 NAIPQ13075 1403 aa7.29□□□□□ -1.24
CSMD3-208ENST00000497026 KANK1Q14678 1352 aa7.28□□□□□ -1.24
CSMD3-208ENST00000497026 UBAP1LF5GYI3 381 aa7.28□□□□□ -1.24
CSMD3-208ENST00000497026 EGFRP00533 1210 aa7.28□□□□□ -1.24
CSMD3-208ENST00000497026 ZAP70P43403 619 aa7.28□□□□□ -1.24
CSMD3-208ENST00000497026 GPLD1P80108 840 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms