RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 MEGF11A6BM72 1044 aa6.68□□□□□ -1.34
VPS26A-208ENST00000497022 C8AP07357 584 aa6.68□□□□□ -1.34
VPS26A-208ENST00000497022 ITGB5P18084 799 aa6.68□□□□□ -1.34
VPS26A-208ENST00000497022 MAP4P27816 1152 aaKnown RBP6.68□□□□□ -1.34
VPS26A-208ENST00000497022 METTL22Q9BUU2 404 aaPredicted RBP6.68□□□□□ -1.34
VPS26A-208ENST00000497022 STIM2Q9P246 746 aa6.68□□□□□ -1.34
VPS26A-208ENST00000497022 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
VPS26A-208ENST00000497022 POP1Q99575 1024 aaKnown RBP6.67□□□□□ -1.34
VPS26A-208ENST00000497022 OSBPL1AQ9BXW6 950 aa6.67□□□□□ -1.34
VPS26A-208ENST00000497022 ZBTB39O15060 712 aa6.66□□□□□ -1.34
VPS26A-208ENST00000497022 F13BP05160 661 aa6.66□□□□□ -1.34
VPS26A-208ENST00000497022 SSFA2P28290 1259 aa6.66□□□□□ -1.34
VPS26A-208ENST00000497022 ZAP70P43403 619 aa6.66□□□□□ -1.34
VPS26A-208ENST00000497022 SUPT5HO00267 1087 aaKnown RBP6.65□□□□□ -1.34
VPS26A-208ENST00000497022 NLRP12P59046 1061 aa6.65□□□□□ -1.34
VPS26A-208ENST00000497022 SGO2Q562F6 1265 aa6.65□□□□□ -1.34
VPS26A-208ENST00000497022 PDE12Q6L8Q7 609 aaKnown RBP6.65□□□□□ -1.34
VPS26A-208ENST00000497022 ABTB2Q8N961 1025 aa6.65□□□□□ -1.34
VPS26A-208ENST00000497022 CARNS1A5YM72 827 aa6.64□□□□□ -1.35
VPS26A-208ENST00000497022 ARL4DP49703 201 aa6.64□□□□□ -1.35
VPS26A-208ENST00000497022 NFXL1Q6ZNB6 911 aa6.64□□□□□ -1.35
VPS26A-208ENST00000497022 TP53INP2Q8IXH6 220 aa6.64□□□□□ -1.35
VPS26A-208ENST00000497022 FBXL6Q8N531 539 aa6.64□□□□□ -1.35
VPS26A-208ENST00000497022 SMG8Q8ND04 991 aaKnown RBP6.64□□□□□ -1.35
VPS26A-208ENST00000497022 AGBL5Q8NDL9 886 aa6.64□□□□□ -1.35
VPS26A-208ENST00000497022 SUGCTQ9HAC7 445 aa6.64□□□□□ -1.35
VPS26A-208ENST00000497022 BSDC1Q9NW68 430 aaPredicted RBP6.64□□□□□ -1.35
VPS26A-208ENST00000497022 TIAF1O95411 115 aa6.63□□□□□ -1.35
VPS26A-208ENST00000497022 CYP2E1P05181 493 aaPredicted RBP6.63□□□□□ -1.35
VPS26A-208ENST00000497022 RXRBP28702 533 aa6.63□□□□□ -1.35
VPS26A-208ENST00000497022 NUTM2GQ5VZR2 741 aa6.63□□□□□ -1.35
VPS26A-208ENST00000497022 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
VPS26A-208ENST00000497022 GPR152Q8TDT2 470 aa6.63□□□□□ -1.35
VPS26A-208ENST00000497022 CYP4F12Q9HCS2 524 aa6.63□□□□□ -1.35
VPS26A-208ENST00000497022 FAM95CA0A1B0GW59 222 aa6.62□□□□□ -1.35
VPS26A-208ENST00000497022 C19orf57Q0VDD7 668 aa6.62□□□□□ -1.35
VPS26A-208ENST00000497022 PHLDB3Q6NSJ2 640 aa6.62□□□□□ -1.35
VPS26A-208ENST00000497022 PAOXQ6QHF9 649 aa6.62□□□□□ -1.35
VPS26A-208ENST00000497022 GTF3C2Q8WUA4 911 aaPredicted RBP6.62□□□□□ -1.35
VPS26A-208ENST00000497022 TMPRSS13Q9BYE2 586 aa6.62□□□□□ -1.35
VPS26A-208ENST00000497022 ATCAYQ86WG3 371 aa6.61□□□□□ -1.35
VPS26A-208ENST00000497022 SLC7A3Q8WY07 619 aa6.61□□□□□ -1.35
VPS26A-208ENST00000497022 ARID3AQ99856 593 aa6.61□□□□□ -1.35
VPS26A-208ENST00000497022 ELP3Q9H9T3 547 aa6.61□□□□□ -1.35
VPS26A-208ENST00000497022 SALL4Q9UJQ4 1053 aa6.61□□□□□ -1.35
VPS26A-208ENST00000497022 SOX13Q9UN79 622 aa6.61□□□□□ -1.35
VPS26A-208ENST00000497022 TIMELESSQ9UNS1 1208 aa6.61□□□□□ -1.35
VPS26A-208ENST00000497022 NFKBIEO00221 500 aa6.6□□□□□ -1.35
VPS26A-208ENST00000497022 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
VPS26A-208ENST00000497022 CYP26A1O43174 497 aa6.6□□□□□ -1.35
VPS26A-208ENST00000497022 RPLP1P05386 114 aaKnown RBP6.6□□□□□ -1.35
VPS26A-208ENST00000497022 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
VPS26A-208ENST00000497022 KRTAP4-2Q9BYR5 136 aa6.6□□□□□ -1.35
VPS26A-208ENST00000497022 DZANK1Q9NVP4 752 aa6.6□□□□□ -1.35
VPS26A-208ENST00000497022 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
VPS26A-208ENST00000497022 NFKBIBQ15653 356 aa6.59□□□□□ -1.35
VPS26A-208ENST00000497022 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
VPS26A-208ENST00000497022 FLCNQ8NFG4 579 aa6.59□□□□□ -1.35
VPS26A-208ENST00000497022 NUDT16Q96DE0 195 aaKnown RBP6.59□□□□□ -1.35
VPS26A-208ENST00000497022 YIPF2Q9BWQ6 316 aa6.59□□□□□ -1.35
VPS26A-208ENST00000497022 TMEM63CQ9P1W3 806 aa6.59□□□□□ -1.35
VPS26A-208ENST00000497022 KANSL3Q9P2N6 904 aa6.59□□□□□ -1.35
VPS26A-208ENST00000497022 USTQ9Y2C2 406 aa6.59□□□□□ -1.35
VPS26A-208ENST00000497022 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
VPS26A-208ENST00000497022 MPSTP25325 297 aa6.58□□□□□ -1.36
VPS26A-208ENST00000497022 MTMR3Q13615 1198 aa6.58□□□□□ -1.36
VPS26A-208ENST00000497022 ZNF438Q7Z4V0 828 aa6.58□□□□□ -1.36
VPS26A-208ENST00000497022 ZAR1Q86SH2 424 aa6.58□□□□□ -1.36
VPS26A-208ENST00000497022 TMEM102Q8N9M5 508 aaPredicted RBP6.58□□□□□ -1.36
VPS26A-208ENST00000497022 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
VPS26A-208ENST00000497022 TBC1D32Q96NH3 1257 aa6.58□□□□□ -1.36
VPS26A-208ENST00000497022 SOX17Q9H6I2 414 aaPredicted RBP6.58□□□□□ -1.36
VPS26A-208ENST00000497022 PAK6Q9NQU5 681 aaPredicted RBP6.58□□□□□ -1.36
VPS26A-208ENST00000497022 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 NPR3P17342 541 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 EIF1AXP47813 144 aaKnown RBP6.57□□□□□ -1.36
VPS26A-208ENST00000497022 USP11P51784 963 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 XKR5Q6UX68 686 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 BSNDQ8WZ55 320 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 EDEM1Q92611 657 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 PRKAG2Q9UGJ0 569 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 MTMR7Q9Y216 660 aa6.57□□□□□ -1.36
VPS26A-208ENST00000497022 PAPLNO95428 1278 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 CES1P23141 567 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 CYP27A1Q02318 531 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 DNM1Q05193 864 aaKnown RBP6.56□□□□□ -1.36
VPS26A-208ENST00000497022 IKBKEQ14164 716 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 EXOSC6Q5RKV6 272 aaKnown RBP6.56□□□□□ -1.36
VPS26A-208ENST00000497022 ALKBH2Q6NS38 261 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 FBLIM1Q8WUP2 373 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 PMEPA1Q969W9 287 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 USP26Q9BXU7 913 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 CNTN3Q9P232 1028 aa6.56□□□□□ -1.36
VPS26A-208ENST00000497022 BIN1O00499 593 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 SOX1O00570 391 aaPredicted RBP6.55□□□□□ -1.36
VPS26A-208ENST00000497022 FAM13AO94988 1023 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 PDGFAP04085 211 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 ACPPP15309 386 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 PCSK2P16519 638 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 MZF1P28698 734 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms