RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 PIP4K2BP78356 416 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 WFDC12Q8WWY7 111 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 BSNDQ8WZ55 320 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 DNAJC25Q9H1X3 360 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 OSGEPQ9NPF4 335 aa8.06□□□□□ -1.12
TRIM4-205ENST00000496896 Q6ZS46 218 aa8.05□□□□□ -1.12
TRIM4-205ENST00000496896 GALNT11Q8NCW6 608 aa8.05□□□□□ -1.12
TRIM4-205ENST00000496896 SH2B1Q9NRF2 756 aaPredicted RBP8.05□□□□□ -1.12
TRIM4-205ENST00000496896 F8W735 103 aaPredicted RBP8.04□□□□□ -1.12
TRIM4-205ENST00000496896 EIF4EBP3O60516 100 aaPredicted RBP8.04□□□□□ -1.12
TRIM4-205ENST00000496896 CPNE3O75131 537 aaKnown RBP8.04□□□□□ -1.12
TRIM4-205ENST00000496896 NOS3P29474 1203 aa8.04□□□□□ -1.12
TRIM4-205ENST00000496896 CD68P34810 354 aaPredicted RBP8.04□□□□□ -1.12
TRIM4-205ENST00000496896 HHIPQ96QV1 700 aa8.04□□□□□ -1.12
TRIM4-205ENST00000496896 AKTIPQ9H8T0 292 aa8.04□□□□□ -1.12
TRIM4-205ENST00000496896 SEC31BQ9NQW1 1179 aa8.04□□□□□ -1.12
TRIM4-205ENST00000496896 DCTN4Q9UJW0 460 aa8.04□□□□□ -1.12
TRIM4-205ENST00000496896 GPR182O15218 404 aa8.03□□□□□ -1.12
TRIM4-205ENST00000496896 FZD5Q13467 585 aa8.03□□□□□ -1.12
TRIM4-205ENST00000496896 DZIP1LQ8IYY4 767 aaKnown RBP8.03□□□□□ -1.12
TRIM4-205ENST00000496896 TRPA1O75762 1119 aa8.02□□□□□ -1.13
TRIM4-205ENST00000496896 IREB2P48200 963 aaKnown RBP8.02□□□□□ -1.13
TRIM4-205ENST00000496896 KIAA0319Q5VV43 1072 aa8.02□□□□□ -1.13
TRIM4-205ENST00000496896 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.02□□□□□ -1.13
TRIM4-205ENST00000496896 VN1R5Q7Z5H4 357 aa8.02□□□□□ -1.13
TRIM4-205ENST00000496896 CCNJLQ8IV13 435 aa8.02□□□□□ -1.13
TRIM4-205ENST00000496896 SOX17Q9H6I2 414 aaPredicted RBP8.02□□□□□ -1.13
TRIM4-205ENST00000496896 LATS2Q9NRM7 1088 aa8.02□□□□□ -1.13
TRIM4-205ENST00000496896 A0A1W2PP55 124 aa8.01□□□□□ -1.13
TRIM4-205ENST00000496896 SSTR4P31391 388 aa8.01□□□□□ -1.13
TRIM4-205ENST00000496896 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
TRIM4-205ENST00000496896 TMC1Q8TDI8 760 aa8.01□□□□□ -1.13
TRIM4-205ENST00000496896 BIN2Q9UBW5 565 aaPredicted RBP8.01□□□□□ -1.13
TRIM4-205ENST00000496896 EIF1AYO14602 144 aaKnown RBP8□□□□□ -1.13
TRIM4-205ENST00000496896 ARL4DP49703 201 aa8□□□□□ -1.13
TRIM4-205ENST00000496896 ORC1Q13415 861 aa8□□□□□ -1.13
TRIM4-205ENST00000496896 PRR23CQ6ZRP0 262 aa8□□□□□ -1.13
TRIM4-205ENST00000496896 SLC51AQ86UW1 340 aa8□□□□□ -1.13
TRIM4-205ENST00000496896 CARD10Q9BWT7 1032 aa8□□□□□ -1.13
TRIM4-205ENST00000496896 RNF114Q9Y508 228 aa8□□□□□ -1.13
TRIM4-205ENST00000496896 IVNS1ABPQ9Y6Y0 642 aa8□□□□□ -1.13
TRIM4-205ENST00000496896 POLR3DP05423 398 aaPredicted RBP7.99□□□□□ -1.13
TRIM4-205ENST00000496896 TAL1P17542 331 aaPredicted RBP7.99□□□□□ -1.13
TRIM4-205ENST00000496896 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 IKBKEQ14164 716 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 USPL1Q5W0Q7 1092 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 TMC7Q7Z402 723 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 MEGF10Q96KG7 1140 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 TCF12Q99081 682 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 NIF3L1Q9GZT8 377 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 LIN7BQ9HAP6 207 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 KCNK4Q9NYG8 393 aa7.99□□□□□ -1.13
TRIM4-205ENST00000496896 ADAM11O75078 769 aa7.98□□□□□ -1.13
TRIM4-205ENST00000496896 CDC25BP30305 580 aa7.98□□□□□ -1.13
TRIM4-205ENST00000496896 CD97P48960 835 aa7.98□□□□□ -1.13
TRIM4-205ENST00000496896 ASAP3Q8TDY4 903 aa7.98□□□□□ -1.13
TRIM4-205ENST00000496896 FOXD4L4Q8WXT5 416 aaPredicted RBP7.98□□□□□ -1.13
TRIM4-205ENST00000496896 CCDC74AQ96AQ1 378 aa7.98□□□□□ -1.13
TRIM4-205ENST00000496896 CSRNP1Q96S65 589 aa7.98□□□□□ -1.13
TRIM4-205ENST00000496896 CEP41Q9BYV8 373 aa7.98□□□□□ -1.13
TRIM4-205ENST00000496896 SOX1O00570 391 aaPredicted RBP7.97□□□□□ -1.13
TRIM4-205ENST00000496896 TREHO43280 583 aa7.97□□□□□ -1.13
TRIM4-205ENST00000496896 WISP1O95388 367 aa7.97□□□□□ -1.13
TRIM4-205ENST00000496896 ESRRAP11474 423 aaPredicted RBP7.97□□□□□ -1.13
TRIM4-205ENST00000496896 PTPN12Q05209 780 aaKnown RBP7.97□□□□□ -1.13
TRIM4-205ENST00000496896 DSC3Q14574 896 aa7.97□□□□□ -1.13
TRIM4-205ENST00000496896 DUOXA2Q1HG44 320 aa7.97□□□□□ -1.13
TRIM4-205ENST00000496896 UVSSAQ2YD98 709 aa7.97□□□□□ -1.13
TRIM4-205ENST00000496896 KIAA1211Q6ZU35 1233 aa7.97□□□□□ -1.13
TRIM4-205ENST00000496896 A0A096LPE4 126 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 A0A1W2PPZ6 126 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 ALX3O95076 343 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 FSTP19883 344 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 ITPKAP23677 461 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 MAPK1P28482 360 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 PRPF40BQ6NWY9 871 aaKnown RBP7.96□□□□□ -1.14
TRIM4-205ENST00000496896 ACAD11Q709F0 780 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 KRTAP4-9Q9BYQ8 210 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 CLEC4MQ9H2X3 399 aaPredicted RBP7.96□□□□□ -1.14
TRIM4-205ENST00000496896 NPHS2Q9NP85 383 aa7.96□□□□□ -1.14
TRIM4-205ENST00000496896 MEGF11A6BM72 1044 aa7.95□□□□□ -1.14
TRIM4-205ENST00000496896 GRIA4P48058 902 aa7.95□□□□□ -1.14
TRIM4-205ENST00000496896 SLC7A3Q8WY07 619 aa7.95□□□□□ -1.14
TRIM4-205ENST00000496896 EHD4Q9H223 541 aa7.95□□□□□ -1.14
TRIM4-205ENST00000496896 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
TRIM4-205ENST00000496896 OAS3Q9Y6K5 1087 aaKnown RBP7.95□□□□□ -1.14
TRIM4-205ENST00000496896 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
TRIM4-205ENST00000496896 DDX3YO15523 660 aaKnown RBP7.94□□□□□ -1.14
TRIM4-205ENST00000496896 GLB1P16278 677 aa7.94□□□□□ -1.14
TRIM4-205ENST00000496896 ANKRD34AQ69YU3 496 aa7.94□□□□□ -1.14
TRIM4-205ENST00000496896 ZSCAN29Q8IWY8 852 aaPredicted RBP7.94□□□□□ -1.14
TRIM4-205ENST00000496896 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
TRIM4-205ENST00000496896 UBASH3BQ8TF42 649 aa7.94□□□□□ -1.14
TRIM4-205ENST00000496896 ASB16Q96NS5 453 aa7.94□□□□□ -1.14
TRIM4-205ENST00000496896 RNF208Q9H0X6 261 aa7.94□□□□□ -1.14
TRIM4-205ENST00000496896 GP2P55259 537 aaKnown RBP7.93□□□□□ -1.14
TRIM4-205ENST00000496896 PLCB3Q01970 1234 aa7.93□□□□□ -1.14
TRIM4-205ENST00000496896 PCDH1Q08174 1060 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms