RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TTLL12Q14166 644 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-212ENST00000496462 RBM26Q5T8P6 1007 aaKnown RBP10.38□□□□□ -0.75
U2AF1-212ENST00000496462 PNMA8AQ86V59 439 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-212ENST00000496462 LTBP3Q9NS15 1303 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 GYG1P46976 350 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 EAPPQ56P03 285 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-212ENST00000496462 STRIP1Q5VSL9 837 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 CCDC102BQ68D86 513 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 OLFM4Q6UX06 510 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 AOX1Q06278 1338 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 F8W031 263 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-212ENST00000496462 RAD17O75943 681 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 USP17L8P0C7I0 530 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 SPATA5Q8NB90 893 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 HACL1Q9UJ83 578 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 VIRMAQ69YN4 1812 aaKnown RBP10.37□□□□□ -0.75
U2AF1-212ENST00000496462 REC8O95072 547 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 TRDNQ13061 729 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 CTNNA3Q9UI47 895 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 TTF2Q9UNY4 1162 aaKnown RBP10.37□□□□□ -0.75
U2AF1-212ENST00000496462 UBR2Q8IWV8 1755 aa10.37□□□□□ -0.75
U2AF1-212ENST00000496462 GOLIM4O00461 696 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 DBNDD2Q9BQY9 259 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 SASH1O94885 1247 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 CYP7A1P22680 504 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 NMRK2Q9NPI5 230 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 PAG1Q9NWQ8 432 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-212ENST00000496462 MAP4K4O95819 1239 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-212ENST00000496462 TICAM2Q86XR7 235 aa10.36□□□□□ -0.75
U2AF1-212ENST00000496462 CRACR2BQ8N4Y2 399 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-212ENST00000496462 SIPA1L3O60292 1781 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-212ENST00000496462 GNAT2P19087 354 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 NUCB1Q02818 461 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 VEZTQ9HBM0 779 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 VEGFAP15692 232 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-212ENST00000496462 ATP5JP18859 108 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 BCAMP50895 628 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 C15orf52Q6ZUT6 534 aaKnown RBP10.35□□□□□ -0.75
U2AF1-212ENST00000496462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.35□□□□□ -0.75
U2AF1-212ENST00000496462 N4BP2Q86UW6 1770 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-212ENST00000496462 CDC45O75419 566 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 POLR3DP05423 398 aaPredicted RBP10.35□□□□□ -0.75
U2AF1-212ENST00000496462 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
U2AF1-212ENST00000496462 ZKSCAN1P17029 563 aaPredicted RBP10.34□□□□□ -0.75
U2AF1-212ENST00000496462 C3orf67Q6ZVT6 689 aa10.34□□□□□ -0.75
U2AF1-212ENST00000496462 GPC2Q8N158 579 aa10.34□□□□□ -0.75
U2AF1-212ENST00000496462 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
U2AF1-212ENST00000496462 TDO2P48775 406 aa10.34□□□□□ -0.75
U2AF1-212ENST00000496462 C1QTNF8P60827 252 aa10.34□□□□□ -0.75
U2AF1-212ENST00000496462 KIAA0825Q8IV33 1275 aa10.34□□□□□ -0.75
U2AF1-212ENST00000496462 RRAGCQ9HB90 399 aa10.34□□□□□ -0.75
U2AF1-212ENST00000496462 NFKBIEO00221 500 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 SUPT20HL1Q3ZLR7 823 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 SLC9C2Q5TAH2 1124 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 DCAF15Q66K64 600 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 TTC6Q86TZ1 520 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 MAGEB6P1A0A0J9YX57 407 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 RFX5P48382 616 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 PDE1AP54750 535 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 APOBEC3FQ8IUX4 373 aaKnown RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 RTFDC1Q9BY42 306 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 PHKA1P46020 1223 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 FKBP1AP62942 108 aaKnown RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 DPF2Q92785 391 aa10.33□□□□□ -0.76
U2AF1-212ENST00000496462 EAF2Q96CJ1 260 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 FAM84BQ96KN1 310 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 CTDP1Q9Y5B0 961 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-212ENST00000496462 HDLBPQ00341 1268 aaKnown RBP10.32□□□□□ -0.76
U2AF1-212ENST00000496462 POLLQ9UGP5 575 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 ERICH2A1L162 156 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 ATG9AQ7Z3C6 839 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 FBXO33Q7Z6M2 555 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 RALYLQ86SE5 291 aaKnown RBP10.32□□□□□ -0.76
U2AF1-212ENST00000496462 CABP5Q9NP86 173 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 CHD4Q14839 1912 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 RNF113AO15541 343 aaKnown RBP10.32□□□□□ -0.76
U2AF1-212ENST00000496462 TEX11Q8IYF3 940 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 NAPBQ9H115 298 aa10.32□□□□□ -0.76
U2AF1-212ENST00000496462 ADARB2Q9NS39 739 aaKnown RBP10.32□□□□□ -0.76
U2AF1-212ENST00000496462 CNOT7Q9UIV1 285 aaKnown RBP10.32□□□□□ -0.76
U2AF1-212ENST00000496462 SART3Q15020 963 aaKnown RBP10.31□□□□□ -0.76
U2AF1-212ENST00000496462 TDRD7Q8NHU6 1098 aaKnown RBP10.31□□□□□ -0.76
U2AF1-212ENST00000496462 KAZALD1Q96I82 304 aa10.31□□□□□ -0.76
U2AF1-212ENST00000496462 ZNF512BQ96KM6 892 aaPredicted RBP10.31□□□□□ -0.76
U2AF1-212ENST00000496462 PPP1R12BO60237 982 aaPredicted RBP10.31□□□□□ -0.76
U2AF1-212ENST00000496462 RNF41Q9H4P4 317 aaPredicted RBP10.31□□□□□ -0.76
U2AF1-212ENST00000496462 SYNE3Q6ZMZ3 975 aa10.31□□□□□ -0.76
U2AF1-212ENST00000496462 MAGEB6Q8N7X4 407 aa10.31□□□□□ -0.76
U2AF1-212ENST00000496462 KBTBD3Q8NAB2 608 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms