RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
TBRG4-217ENST00000495973 USP25Q9UHP3 1055 aa13.14□□□□□ -0.31
TBRG4-217ENST00000495973 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
TBRG4-217ENST00000495973 GOLGB1Q14789 3259 aaKnown RBP13.14□□□□□ -0.31
TBRG4-217ENST00000495973 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
TBRG4-217ENST00000495973 ITGB4P16144 1822 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
TBRG4-217ENST00000495973 PUM3Q15397 648 aaKnown RBP13.13□□□□□ -0.31
TBRG4-217ENST00000495973 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 NKX2-3Q8TAU0 364 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 FOXP2O15409 715 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 RASGRF1Q13972 1273 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 CCDC82Q8N4S0 544 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 CPLX1O14810 134 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 SLC5A1P13866 664 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 PDE6AP16499 860 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 ERFEQ4G0M1 354 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
TBRG4-217ENST00000495973 B4E1Z4 1266 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 PRKAB2O43741 272 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
TBRG4-217ENST00000495973 GYG1P46976 350 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 TRDNQ13061 729 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 ZKSCAN3Q9BRR0 538 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 ERVV-1B6SEH8 477 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 TOM1O60784 492 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 MBD4O95243 580 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 CTDNEP1O95476 244 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 PDIA3P30101 505 aaKnown RBP13.12□□□□□ -0.31
TBRG4-217ENST00000495973 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 NFXL1Q6ZNB6 911 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 SPATA5Q8NB90 893 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
TBRG4-217ENST00000495973 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
TBRG4-217ENST00000495973 HMGB1P09429 215 aaKnown RBP13.11□□□□□ -0.31
TBRG4-217ENST00000495973 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
TBRG4-217ENST00000495973 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 LPIN2Q92539 896 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 SPATA31A5Q5VU36 1347 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 SPATA31A7Q8IWB4 1347 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 A0A087WWV3 80 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
TBRG4-217ENST00000495973 ADD2P35612 726 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 CHRNDQ07001 517 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 TBC1D10CQ8IV04 446 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 ERCC4Q92889 916 aaPredicted RBP13.11□□□□□ -0.31
TBRG4-217ENST00000495973 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
TBRG4-217ENST00000495973 SENP2Q9HC62 589 aa13.11□□□□□ -0.31
TBRG4-217ENST00000495973 PFKFB2O60825 505 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 SLC51AQ86UW1 340 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 JCADQ9P266 1359 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 GNPATO15228 680 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
TBRG4-217ENST00000495973 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 LEO1Q8WVC0 666 aaPredicted RBP13.1□□□□□ -0.31
TBRG4-217ENST00000495973 MCM5P33992 734 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 TDO2P48775 406 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 AIFM3Q96NN9 605 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 NAPBQ9H115 298 aa13.1□□□□□ -0.31
TBRG4-217ENST00000495973 MINDY4BA8MYZ0 360 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 EP400Q96L91 3159 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 CHAF1AQ13111 956 aaPredicted RBP13.09□□□□□ -0.31
TBRG4-217ENST00000495973 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
TBRG4-217ENST00000495973 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
TBRG4-217ENST00000495973 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
TBRG4-217ENST00000495973 RFX7Q2KHR2 1363 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 NTSR2O95665 410 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 ADD1P35611 737 aaKnown RBP13.09□□□□□ -0.31
TBRG4-217ENST00000495973 MAP3K12Q12852 859 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 PHKBQ93100 1093 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 TNMDQ9H2S6 317 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
TBRG4-217ENST00000495973 MROH5Q6ZUA9 1318 aa13.08□□□□□ -0.32
TBRG4-217ENST00000495973 SMIM22K7EJ46 135 aa13.08□□□□□ -0.32
TBRG4-217ENST00000495973 NR1I2O75469 434 aa13.08□□□□□ -0.32
TBRG4-217ENST00000495973 ANTXR2P58335 489 aa13.08□□□□□ -0.32
TBRG4-217ENST00000495973 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.32
TBRG4-217ENST00000495973 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
TBRG4-217ENST00000495973 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
TBRG4-217ENST00000495973 SPC24Q8NBT2 197 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms