RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 RPS6KB1P23443 525 aa17.67■□□□□ 0.42
CHPF2-204ENST00000495645 NEK1Q96PY6 1258 aa17.67■□□□□ 0.42
CHPF2-204ENST00000495645 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
CHPF2-204ENST00000495645 SPEF2Q9C093 1822 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 MYO5AQ9Y4I1 1855 aaKnown RBP17.66■□□□□ 0.42
CHPF2-204ENST00000495645 APPP05067 770 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 ARID4AP29374 1257 aaPredicted RBP17.66■□□□□ 0.42
CHPF2-204ENST00000495645 ADGRA1Q86SQ6 560 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 ADD2P35612 726 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 RNF20Q5VTR2 975 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 MSL1Q68DK7 614 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 POTEAQ6S8J7 498 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
CHPF2-204ENST00000495645 DDX49Q9Y6V7 483 aaKnown RBP17.66■□□□□ 0.42
CHPF2-204ENST00000495645 SBF2Q86WG5 1849 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
CHPF2-204ENST00000495645 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 Q6ZUG5 572 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 BRF1Q92994 677 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 NAP1L2Q9ULW6 460 aaPredicted RBP17.65■□□□□ 0.42
CHPF2-204ENST00000495645 BRWD3Q6RI45 1802 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 DDR1Q08345 913 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 OLFM4Q6UX06 510 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 CNBD1Q8NA66 436 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHPF2-204ENST00000495645 APPBP2Q92624 585 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
CHPF2-204ENST00000495645 BSDC1Q9NW68 430 aaPredicted RBP17.65■□□□□ 0.42
CHPF2-204ENST00000495645 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
CHPF2-204ENST00000495645 E7EWF7 191 aa17.64■□□□□ 0.42
CHPF2-204ENST00000495645 MCM2P49736 904 aa17.64■□□□□ 0.42
CHPF2-204ENST00000495645 AKAP11Q9UKA4 1901 aa17.64■□□□□ 0.41
CHPF2-204ENST00000495645 FOSBP53539 338 aa17.64■□□□□ 0.41
CHPF2-204ENST00000495645 SLC10A5Q5PT55 438 aa17.64■□□□□ 0.41
CHPF2-204ENST00000495645 FAM84BQ96KN1 310 aaPredicted RBP17.64■□□□□ 0.41
CHPF2-204ENST00000495645 C4BP0C0L5 1744 aa17.64■□□□□ 0.41
CHPF2-204ENST00000495645 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
CHPF2-204ENST00000495645 TM6SF1Q9BZW5 370 aa17.63■□□□□ 0.41
CHPF2-204ENST00000495645 TCRBV5S4A2TA0A5A2 114 aa17.63■□□□□ 0.41
CHPF2-204ENST00000495645 JAK2O60674 1132 aa17.63■□□□□ 0.41
CHPF2-204ENST00000495645 NCOA5Q9HCD5 579 aaKnown RBP17.63■□□□□ 0.41
CHPF2-204ENST00000495645 GJB2P29033 226 aa17.63■□□□□ 0.41
CHPF2-204ENST00000495645 APOBRQ0VD83 1088 aa17.63■□□□□ 0.41
CHPF2-204ENST00000495645 CHAF1AQ13111 956 aaPredicted RBP17.63■□□□□ 0.41
CHPF2-204ENST00000495645 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
CHPF2-204ENST00000495645 LRP2BPQ9P2M1 347 aa17.63■□□□□ 0.41
CHPF2-204ENST00000495645 COL1A1P02452 1464 aaPredicted RBP17.62■□□□□ 0.41
CHPF2-204ENST00000495645 MBD4O95243 580 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 SERPINB2P05120 415 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 FGD1P98174 961 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 EVX2Q03828 476 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 CAVIN1Q6NZI2 390 aaKnown RBP17.62■□□□□ 0.41
CHPF2-204ENST00000495645 FAM173BQ6P4H8 233 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 NBPF3Q9H094 633 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 RBM27Q9P2N5 1060 aaKnown RBP17.62■□□□□ 0.41
CHPF2-204ENST00000495645 NSFL1CQ9UNZ2 370 aaKnown RBP17.62■□□□□ 0.41
CHPF2-204ENST00000495645 PRPF40AO75400 957 aaKnown RBP17.62■□□□□ 0.41
CHPF2-204ENST00000495645 PSMA5P28066 241 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 CCT2P78371 535 aaKnown RBP17.62■□□□□ 0.41
CHPF2-204ENST00000495645 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 DSCC1Q9BVC3 393 aa17.62■□□□□ 0.41
CHPF2-204ENST00000495645 CWC22Q9HCG8 908 aaKnown RBP17.62■□□□□ 0.41
CHPF2-204ENST00000495645 SYT1P21579 422 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 SLC4A8Q2Y0W8 1093 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 FERMT3Q86UX7 667 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 LCORLQ8N3X6 602 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 ZNF384Q8TF68 577 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 BCORQ6W2J9 1755 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
CHPF2-204ENST00000495645 NUCB2P80303 420 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 SMC3Q9UQE7 1217 aa17.61■□□□□ 0.41
CHPF2-204ENST00000495645 LRP5O75197 1615 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 UQCRFS1P1P0C7P4 283 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 COL23A1Q86Y22 540 aaPredicted RBP17.6■□□□□ 0.41
CHPF2-204ENST00000495645 SDR42E1Q8WUS8 393 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHPF2-204ENST00000495645 ANKIB1Q9P2G1 1089 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 TACC3Q9Y6A5 838 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 RTL9Q8NET4 1388 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 BRD1O95696 1058 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 AIDAQ96BJ3 306 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
CHPF2-204ENST00000495645 RAI14Q9P0K7 980 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 TAF1LQ8IZX4 1826 aa17.6■□□□□ 0.41
CHPF2-204ENST00000495645 RFX7Q2KHR2 1363 aa17.59■□□□□ 0.41
CHPF2-204ENST00000495645 ESPNB1AK53 854 aa17.59■□□□□ 0.41
CHPF2-204ENST00000495645 KDM4AO75164 1064 aa17.59■□□□□ 0.41
CHPF2-204ENST00000495645 TSGA10IPQ3SY00 556 aa17.59■□□□□ 0.41
CHPF2-204ENST00000495645 INTS4Q96HW7 963 aaKnown RBP17.59■□□□□ 0.41
CHPF2-204ENST00000495645 PDGFDQ9GZP0 370 aaPredicted RBP17.59■□□□□ 0.41
CHPF2-204ENST00000495645 SENP2Q9HC62 589 aa17.59■□□□□ 0.41
CHPF2-204ENST00000495645 CICQ96RK0 1608 aaPredicted RBP17.59■□□□□ 0.41
CHPF2-204ENST00000495645 CTDSPL2Q05D32 466 aa17.59■□□□□ 0.41
CHPF2-204ENST00000495645 TRIM44Q96DX7 344 aaPredicted RBP17.59■□□□□ 0.41
CHPF2-204ENST00000495645 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
CHPF2-204ENST00000495645 STRBPQ96SI9 672 aaKnown RBP17.59■□□□□ 0.41
CHPF2-204ENST00000495645 VPS37CA5D8V6 355 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms