RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 CREB3L3Q68CJ9 461 aa18.67■□□□□ 0.58
SHISA5-216ENST00000494854 ZNF589Q86UQ0 364 aaPredicted RBP18.67■□□□□ 0.58
SHISA5-216ENST00000494854 DDX60Q8IY21 1712 aaKnown RBP18.67■□□□□ 0.58
SHISA5-216ENST00000494854 AK2P54819 239 aa18.66■□□□□ 0.58
SHISA5-216ENST00000494854 DPY19L2Q6NUT2 758 aa18.66■□□□□ 0.58
SHISA5-216ENST00000494854 DDX46Q7L014 1031 aaKnown RBP18.66■□□□□ 0.58
SHISA5-216ENST00000494854 JAKMIP1Q96N16 626 aaKnown RBP18.66■□□□□ 0.58
SHISA5-216ENST00000494854 GOLGA6L22H0YM25 854 aa18.66■□□□□ 0.58
SHISA5-216ENST00000494854 PPEF1O14829 653 aaPredicted RBP18.66■□□□□ 0.58
SHISA5-216ENST00000494854 TOMM70O94826 608 aa18.66■□□□□ 0.58
SHISA5-216ENST00000494854 SF3B3Q15393 1217 aaKnown RBP18.66■□□□□ 0.58
SHISA5-216ENST00000494854 ADCK5Q3MIX3 580 aa18.66■□□□□ 0.58
SHISA5-216ENST00000494854 KBTBD3Q8NAB2 608 aa18.66■□□□□ 0.58
SHISA5-216ENST00000494854 IRS4O14654 1257 aaPredicted RBP18.65■□□□□ 0.58
SHISA5-216ENST00000494854 HSP90B1P14625 803 aaKnown RBP18.65■□□□□ 0.58
SHISA5-216ENST00000494854 TTLL11Q8NHH1 800 aa18.65■□□□□ 0.58
SHISA5-216ENST00000494854 ZSWIM6Q9HCJ5 1215 aa18.65■□□□□ 0.58
SHISA5-216ENST00000494854 PAG1Q9NWQ8 432 aa18.65■□□□□ 0.58
SHISA5-216ENST00000494854 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
SHISA5-216ENST00000494854 ZDHHC9Q9Y397 364 aa18.65■□□□□ 0.58
SHISA5-216ENST00000494854 ATP6V0A2Q9Y487 856 aa18.65■□□□□ 0.58
SHISA5-216ENST00000494854 SLC27A2O14975 620 aa18.64■□□□□ 0.58
SHISA5-216ENST00000494854 CTSWP56202 376 aa18.64■□□□□ 0.58
SHISA5-216ENST00000494854 RRAGCQ9HB90 399 aa18.64■□□□□ 0.58
SHISA5-216ENST00000494854 TAF5LO75529 589 aa18.64■□□□□ 0.57
SHISA5-216ENST00000494854 IFIT1P09914 478 aaKnown RBP18.64■□□□□ 0.57
SHISA5-216ENST00000494854 CPA1P15085 419 aa18.64■□□□□ 0.57
SHISA5-216ENST00000494854 SKOR2Q2VWA4 1001 aaPredicted RBP18.64■□□□□ 0.57
SHISA5-216ENST00000494854 VPS53Q5VIR6 699 aa18.64■□□□□ 0.57
SHISA5-216ENST00000494854 RNF20Q5VTR2 975 aa18.64■□□□□ 0.57
SHISA5-216ENST00000494854 ZNF277Q9NRM2 450 aaPredicted RBP18.64■□□□□ 0.57
SHISA5-216ENST00000494854 LIMCH1Q9UPQ0 1083 aa18.64■□□□□ 0.57
SHISA5-216ENST00000494854 CYP46A1Q9Y6A2 500 aa18.64■□□□□ 0.57
SHISA5-216ENST00000494854 RPAP1Q9BWH6 1393 aaPredicted RBP18.63■□□□□ 0.57
SHISA5-216ENST00000494854 GOLIM4O00461 696 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 ITGA6P23229 1130 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 RUFY3Q7L099 469 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 TMC4Q7Z404 712 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 TICAM2Q86XR7 235 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 SP8Q8IXZ3 490 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
SHISA5-216ENST00000494854 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
SHISA5-216ENST00000494854 GREM2Q9H772 168 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 PDRG1Q9NUG6 133 aa18.63■□□□□ 0.57
SHISA5-216ENST00000494854 ANKRD18BA2A2Z9 1011 aa18.62■□□□□ 0.57
SHISA5-216ENST00000494854 PDE8AO60658 829 aa18.62■□□□□ 0.57
SHISA5-216ENST00000494854 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
SHISA5-216ENST00000494854 GRAPQ13588 217 aa18.62■□□□□ 0.57
SHISA5-216ENST00000494854 MCMDC2Q4G0Z9 681 aa18.62■□□□□ 0.57
SHISA5-216ENST00000494854 GRAPLQ8TC17 118 aaPredicted RBP18.62■□□□□ 0.57
SHISA5-216ENST00000494854 GZF1Q9H116 711 aaPredicted RBP18.62■□□□□ 0.57
SHISA5-216ENST00000494854 WDR90Q96KV7 1748 aa18.62■□□□□ 0.57
SHISA5-216ENST00000494854 CHGBP05060 677 aa18.62■□□□□ 0.57
SHISA5-216ENST00000494854 VEGFAP15692 232 aaPredicted RBP18.62■□□□□ 0.57
SHISA5-216ENST00000494854 RBM46Q8TBY0 533 aaKnown RBP18.62■□□□□ 0.57
SHISA5-216ENST00000494854 HMG20BQ9P0W2 317 aa18.62■□□□□ 0.57
SHISA5-216ENST00000494854 PSMA5P28066 241 aa18.61■□□□□ 0.57
SHISA5-216ENST00000494854 CCDC158Q5M9N0 1113 aa18.61■□□□□ 0.57
SHISA5-216ENST00000494854 XAGE2Q96GT9 111 aa18.61■□□□□ 0.57
SHISA5-216ENST00000494854 SEC62Q99442 399 aaKnown RBP18.61■□□□□ 0.57
SHISA5-216ENST00000494854 VPS33BQ9H267 617 aa18.61■□□□□ 0.57
SHISA5-216ENST00000494854 RIPOR2Q9Y4F9 1068 aa18.61■□□□□ 0.57
SHISA5-216ENST00000494854 MCTP1Q6DN14 999 aa18.61■□□□□ 0.57
SHISA5-216ENST00000494854 LDHAL6AQ6ZMR3 332 aa18.61■□□□□ 0.57
SHISA5-216ENST00000494854 TAF1P21675 1872 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 MYH7P12883 1935 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 BRD1O95696 1058 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 ADORA1P30542 326 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 TSGA10IPQ3SY00 556 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 TTC39AQ5SRH9 613 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 GORABQ5T7V8 394 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 CCDC129Q6ZRS4 1044 aa18.6■□□□□ 0.57
SHISA5-216ENST00000494854 LARP6Q9BRS8 491 aaKnown RBP18.6■□□□□ 0.57
SHISA5-216ENST00000494854 RTFDC1Q9BY42 306 aaPredicted RBP18.6■□□□□ 0.57
SHISA5-216ENST00000494854 POTECB2RU33 542 aa18.59■□□□□ 0.57
SHISA5-216ENST00000494854 FZD9O00144 591 aa18.59■□□□□ 0.57
SHISA5-216ENST00000494854 METTL24Q5JXM2 366 aa18.59■□□□□ 0.57
SHISA5-216ENST00000494854 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
SHISA5-216ENST00000494854 JDP2Q8WYK2 163 aa18.59■□□□□ 0.57
SHISA5-216ENST00000494854 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
SHISA5-216ENST00000494854 CNNM1Q9NRU3 951 aa18.59■□□□□ 0.57
SHISA5-216ENST00000494854 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
SHISA5-216ENST00000494854 U3KPZ7 1027 aaPredicted RBP18.59■□□□□ 0.57
SHISA5-216ENST00000494854 BLOC1S2Q6QNY1 142 aa18.58■□□□□ 0.56
SHISA5-216ENST00000494854 SUPT20HQ8NEM7 779 aa18.58■□□□□ 0.56
SHISA5-216ENST00000494854 AKAP11Q9UKA4 1901 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 DDNO94850 711 aaPredicted RBP18.57■□□□□ 0.56
SHISA5-216ENST00000494854 LARGE1O95461 756 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 HSPA6P17066 643 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 FSTL1Q12841 308 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 ATP2B3Q16720 1220 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 ZMYM1Q5SVZ6 1142 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 L3MBTL3Q96JM7 780 aaPredicted RBP18.57■□□□□ 0.56
SHISA5-216ENST00000494854 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
SHISA5-216ENST00000494854 TAF6LQ9Y6J9 622 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 LAMA4Q16363 1823 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 LRRC37AA6NMS7 1700 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 KRT32Q14532 448 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 SLC51AQ86UW1 340 aa18.57■□□□□ 0.56
SHISA5-216ENST00000494854 MPNDQ8N594 471 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms