RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 GREM1O60565 184 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 MMP16P51512 607 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 RAB15P59190 212 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 SSRP1Q08945 709 aaKnown RBP8.54□□□□□ -1.04
SNX13-210ENST00000494402 SEPT6Q14141 434 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 GRIN2CQ14957 1233 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 RTN1Q16799 776 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 NXNQ6DKJ4 435 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
SNX13-210ENST00000494402 TCEAL8Q8IYN2 117 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 OR6P1Q8NGX9 317 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 SNX29Q8TEQ0 813 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 CDH19Q9H159 772 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 ARHGEF10LQ9HCE6 1279 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 UBP1Q9NZI7 540 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 TAGLN3Q9UI15 199 aa8.54□□□□□ -1.04
SNX13-210ENST00000494402 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 EPB41L2O43491 1005 aaKnown RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 DIAPH1O60610 1272 aaKnown RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 STAU1O95793 577 aaKnown RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 MYL3P08590 195 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 CPEP16870 476 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 GIPRP48546 466 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 PIN1Q13526 163 aaPredicted RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 MLC1Q15049 377 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 GFOD2Q3B7J2 385 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 TMEM67Q5HYA8 995 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 AKAP4Q5JQC9 854 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 CCDC70Q6NSX1 233 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 POTEAQ6S8J7 498 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 NYAP1Q6ZVC0 841 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 RNF180Q86T96 592 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 SPICE1Q8N0Z3 855 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 ZNF669Q96BR6 464 aaPredicted RBP8.53□□□□□ -1.04
SNX13-210ENST00000494402 RHOVQ96L33 236 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 CRBNQ96SW2 442 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 NPHS2Q9NP85 383 aa8.53□□□□□ -1.04
SNX13-210ENST00000494402 KATNA1O75449 491 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 TNFRSF21O75509 655 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 LDHCP07864 332 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 WNT7BP56706 349 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 PURAQ00577 322 aaKnown RBP8.52□□□□□ -1.05
SNX13-210ENST00000494402 MTFR1Q15390 333 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 FAM102BQ5T8I3 360 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 ICE2Q659A1 982 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 LARP1BQ659C4 914 aaKnown RBP8.52□□□□□ -1.05
SNX13-210ENST00000494402 DGKHQ86XP1 1220 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 TREML1Q86YW5 311 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 SLITRK4Q8IW52 837 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 SMAP1Q8IYB5 467 aaPredicted RBP8.52□□□□□ -1.05
SNX13-210ENST00000494402 UBR7Q8N806 425 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 ST13P5Q8NFI4 369 aaPredicted RBP8.52□□□□□ -1.05
SNX13-210ENST00000494402 CAMKK2Q96RR4 588 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.05
SNX13-210ENST00000494402 PTPRHQ9HD43 1115 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 PPP4R2Q9NY27 417 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 FOXD3Q9UJU5 478 aaPredicted RBP8.52□□□□□ -1.05
SNX13-210ENST00000494402 PPT2Q9UMR5 302 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 MAPRE3Q9UPY8 281 aa8.52□□□□□ -1.05
SNX13-210ENST00000494402 ZPR1O75312 459 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 CALRP27797 417 aaKnown RBP8.51□□□□□ -1.05
SNX13-210ENST00000494402 HIRAP54198 1017 aaPredicted RBP8.51□□□□□ -1.05
SNX13-210ENST00000494402 RASSF7Q02833 373 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 FAM160A1Q05DH4 1040 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 ESCO1Q5FWF5 840 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 SPATC1Q76KD6 591 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 NECAB2Q7Z6G3 386 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 DRC7Q8IY82 874 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 ALDH16A1Q8IZ83 802 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 AFAP1L2Q8N4X5 818 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 RIN3Q8TB24 985 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 C1QTNF2Q9BXJ5 285 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 AS3MTQ9HBK9 375 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 ZFYVE28Q9HCC9 887 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 ZMYM5Q9UJ78 669 aa8.51□□□□□ -1.05
SNX13-210ENST00000494402 TPX2Q9ULW0 747 aaKnown RBP8.51□□□□□ -1.05
SNX13-210ENST00000494402 GJB6O95452 261 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 F2P00734 622 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 FAM163BP0C2L3 166 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 NBPF7P0C2Y1 421 aaPredicted RBP8.5□□□□□ -1.05
SNX13-210ENST00000494402 GARTP22102 1010 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 CASP2P42575 452 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 SMTNP53814 917 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 KCTD2Q14681 263 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 ALFQ53S48 1182 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 PASD1Q8IV76 773 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 TRMT44Q8IYL2 757 aaKnown RBP8.5□□□□□ -1.05
SNX13-210ENST00000494402 CXorf38Q8TB03 319 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 FOXJ1Q92949 421 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 SUV39H2Q9H5I1 410 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 AASDHPPTQ9NRN7 309 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 KLK14Q9P0G3 267 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms