RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 VN1R5Q7Z5H4 357 aa9.75□□□□□ -0.85
SSB-212ENST00000494051 GALNT11Q8NCW6 608 aa9.75□□□□□ -0.85
SSB-212ENST00000494051 WWC3Q9ULE0 1092 aa9.75□□□□□ -0.85
SSB-212ENST00000494051 C9orf172C9J069 976 aa9.74□□□□□ -0.85
SSB-212ENST00000494051 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
SSB-212ENST00000494051 IKBKEQ14164 716 aa9.74□□□□□ -0.85
SSB-212ENST00000494051 GRM2Q14416 872 aa9.74□□□□□ -0.85
SSB-212ENST00000494051 IGF2-ASQ6U949 168 aa9.74□□□□□ -0.85
SSB-212ENST00000494051 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
SSB-212ENST00000494051 SEC31BQ9NQW1 1179 aa9.74□□□□□ -0.85
SSB-212ENST00000494051 CD68P34810 354 aaPredicted RBP9.73□□□□□ -0.85
SSB-212ENST00000494051 PIP4K2BP78356 416 aa9.73□□□□□ -0.85
SSB-212ENST00000494051 DNAJC14Q6Y2X3 702 aaPredicted RBP9.73□□□□□ -0.85
SSB-212ENST00000494051 DCAF11Q8TEB1 546 aa9.73□□□□□ -0.85
SSB-212ENST00000494051 TRAK1Q9UPV9 953 aa9.73□□□□□ -0.85
SSB-212ENST00000494051 LDHBP07195 334 aaKnown RBP9.72□□□□□ -0.85
SSB-212ENST00000494051 ARL4DP49703 201 aa9.72□□□□□ -0.85
SSB-212ENST00000494051 NRG1Q02297 640 aaPredicted RBP9.72□□□□□ -0.85
SSB-212ENST00000494051 ALG1LQ6GMV1 187 aa9.72□□□□□ -0.85
SSB-212ENST00000494051 KLHL23Q8NBE8 558 aa9.72□□□□□ -0.85
SSB-212ENST00000494051 KLHDC7BQ96G42 594 aa9.72□□□□□ -0.85
SSB-212ENST00000494051 PPP4R2Q9NY27 417 aa9.72□□□□□ -0.85
SSB-212ENST00000494051 SOX1O00570 391 aaPredicted RBP9.71□□□□□ -0.86
SSB-212ENST00000494051 MSTNO14793 375 aa9.71□□□□□ -0.86
SSB-212ENST00000494051 HGSNATQ68CP4 663 aa9.71□□□□□ -0.86
SSB-212ENST00000494051 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
SSB-212ENST00000494051 WNT8BQ93098 351 aa9.71□□□□□ -0.86
SSB-212ENST00000494051 BCO2Q9BYV7 579 aa9.71□□□□□ -0.86
SSB-212ENST00000494051 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
SSB-212ENST00000494051 DDX3YO15523 660 aaKnown RBP9.7□□□□□ -0.86
SSB-212ENST00000494051 C19orf57Q0VDD7 668 aa9.7□□□□□ -0.86
SSB-212ENST00000494051 FOXD4L6Q3SYB3 417 aaPredicted RBP9.7□□□□□ -0.86
SSB-212ENST00000494051 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
SSB-212ENST00000494051 PRPF40BQ6NWY9 871 aaKnown RBP9.7□□□□□ -0.86
SSB-212ENST00000494051 NXPE4Q6UWF7 544 aa9.7□□□□□ -0.86
SSB-212ENST00000494051 FOXD4L3Q6VB84 417 aaPredicted RBP9.7□□□□□ -0.86
SSB-212ENST00000494051 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
SSB-212ENST00000494051 CLEC4MQ9H2X3 399 aaPredicted RBP9.7□□□□□ -0.86
SSB-212ENST00000494051 ABCB6Q9NP58 842 aa9.7□□□□□ -0.86
SSB-212ENST00000494051 OSGEPQ9NPF4 335 aa9.7□□□□□ -0.86
SSB-212ENST00000494051 KCNK4Q9NYG8 393 aa9.7□□□□□ -0.86
SSB-212ENST00000494051 ESRRAP11474 423 aaPredicted RBP9.69□□□□□ -0.86
SSB-212ENST00000494051 GATA4P43694 442 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 FCGRTP55899 365 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 NLRP12P59046 1061 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 PCDH1Q08174 1060 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 MBTPS1Q14703 1052 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 TMCO4Q5TGY1 634 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 NPAS4Q8IUM7 802 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 GLIS3Q8NEA6 775 aa9.69□□□□□ -0.86
SSB-212ENST00000494051 MRPL18Q9H0U6 180 aaKnown RBP9.69□□□□□ -0.86
SSB-212ENST00000494051 TM4SF5O14894 197 aa9.68□□□□□ -0.86
SSB-212ENST00000494051 ITPKAP23677 461 aa9.68□□□□□ -0.86
SSB-212ENST00000494051 TRIM26Q12899 539 aaPredicted RBP9.68□□□□□ -0.86
SSB-212ENST00000494051 ADGRE1Q14246 886 aa9.68□□□□□ -0.86
SSB-212ENST00000494051 COL19A1Q14993 1142 aa9.68□□□□□ -0.86
SSB-212ENST00000494051 ADAM11O75078 769 aa9.67□□□□□ -0.86
SSB-212ENST00000494051 IREB2P48200 963 aaKnown RBP9.67□□□□□ -0.86
SSB-212ENST00000494051 DUOXA2Q1HG44 320 aa9.67□□□□□ -0.86
SSB-212ENST00000494051 ZNF423Q2M1K9 1284 aa9.67□□□□□ -0.86
SSB-212ENST00000494051 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
SSB-212ENST00000494051 WFDC12Q8WWY7 111 aa9.67□□□□□ -0.86
SSB-212ENST00000494051 ZNF576Q9H609 170 aa9.67□□□□□ -0.86
SSB-212ENST00000494051 ALX3O95076 343 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 WISP1O95388 367 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 PROCP04070 461 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 GSTM4Q03013 218 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 ACAD11Q709F0 780 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 TXNRD3Q86VQ6 643 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 FOXD4L4Q8WXT5 416 aaPredicted RBP9.66□□□□□ -0.86
SSB-212ENST00000494051 AKTIPQ9H8T0 292 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 SPG7Q9UQ90 795 aa9.66□□□□□ -0.86
SSB-212ENST00000494051 PRPF40AO75400 957 aaKnown RBP9.65□□□□□ -0.86
SSB-212ENST00000494051 PTPN12Q05209 780 aaKnown RBP9.65□□□□□ -0.86
SSB-212ENST00000494051 LCE3BQ5TA77 95 aa9.65□□□□□ -0.86
SSB-212ENST00000494051 AGGF1Q8N302 714 aaeCLIP9.65□□□□□ -0.862e-26■■□□□ 11.5
SSB-212ENST00000494051 UBASH3BQ8TF42 649 aa9.65□□□□□ -0.86
SSB-212ENST00000494051 OSBPL7Q9BZF2 842 aa9.65□□□□□ -0.86
SSB-212ENST00000494051 SOX17Q9H6I2 414 aaPredicted RBP9.65□□□□□ -0.86
SSB-212ENST00000494051 AKAP2Q9Y2D5 859 aa9.65□□□□□ -0.86
SSB-212ENST00000494051 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
SSB-212ENST00000494051 ERCC3P19447 782 aa9.64□□□□□ -0.87
SSB-212ENST00000494051 NOS3P29474 1203 aa9.64□□□□□ -0.87
SSB-212ENST00000494051 ZNF157P51786 506 aaPredicted RBP9.64□□□□□ -0.87
SSB-212ENST00000494051 TMEM130Q8N3G9 435 aa9.64□□□□□ -0.87
SSB-212ENST00000494051 DUSP9Q99956 384 aaKnown RBP9.64□□□□□ -0.87
SSB-212ENST00000494051 USP26Q9BXU7 913 aa9.64□□□□□ -0.87
SSB-212ENST00000494051 ADAM23O75077 832 aa9.63□□□□□ -0.87
SSB-212ENST00000494051 B3GALT4O96024 378 aa9.63□□□□□ -0.87
SSB-212ENST00000494051 FGD1P98174 961 aa9.63□□□□□ -0.87
SSB-212ENST00000494051 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.63□□□□□ -0.87
SSB-212ENST00000494051 GIPC1O14908 333 aa9.62□□□□□ -0.87
SSB-212ENST00000494051 XRCC5P13010 732 aaKnown RBP9.62□□□□□ -0.87
SSB-212ENST00000494051 DOC2BQ14184 412 aa9.62□□□□□ -0.87
SSB-212ENST00000494051 RPS26P11Q5JNZ5 115 aaPredicted RBP9.62□□□□□ -0.87
SSB-212ENST00000494051 KIAA1211Q6ZU35 1233 aa9.62□□□□□ -0.87
SSB-212ENST00000494051 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
SSB-212ENST00000494051 SRCIN1Q9C0H9 1055 aa9.62□□□□□ -0.87
SSB-212ENST00000494051 ZFYVE1Q9HBF4 777 aa9.62□□□□□ -0.87
SSB-212ENST00000494051 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms