RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 ST5P78524 1137 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 ERFEQ4G0M1 354 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 ZSCAN25Q6NSZ9 544 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 NLGN1Q8N2Q7 840 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 VGLL2Q8N8G2 317 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 FSD1Q9BTV5 496 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 ANKRD2Q9GZV1 360 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 BSDC1Q9NW68 430 aaPredicted RBP8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 QSER1Q2KHR3 1735 aa8.02□□□□□ -1.13
FNDC3B-212ENST00000494000 MCM2P49736 904 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 MYBPC2Q14324 1141 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 NOM1Q5C9Z4 860 aaKnown RBP8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 TSHZ3Q63HK5 1081 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 HSCBQ8IWL3 235 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 KBTBD3Q8NAB2 608 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 XAGE2Q96GT9 111 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 PUS3Q9BZE2 481 aaKnown RBP8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 BOLA2Q9H3K6 86 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 CLGNO14967 610 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 NPHP1O15259 732 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 DHX16O60231 1041 aaKnown RBP8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 KCNQ4P56696 695 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 UBE4AQ14139 1066 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 ZFYVE27Q5T4F4 411 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 DDX46Q7L014 1031 aaKnown RBP8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 CNBD1Q8NA66 436 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 HELLSQ9NRZ9 838 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 PAG1Q9NWQ8 432 aa8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 TLR7Q9NYK1 1049 aaKnown RBP8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 SRP68Q9UHB9 627 aaKnown RBP8.01□□□□□ -1.13
FNDC3B-212ENST00000494000 ST18O60284 1047 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 FGFR2P21802 821 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 TM4SF1P30408 202 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 TIMM10P62072 90 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 TSHZ1Q6ZSZ6 1077 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 ZNF622Q969S3 477 aaKnown RBP eCLIP8□□□□□ -1.139e-6■■□□□ 12.8
FNDC3B-212ENST00000494000 AKT1S1Q96B36 256 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 DDX24Q9GZR7 859 aaKnown RBP eCLIP8□□□□□ -1.137e-7■■■■□ 23.4
FNDC3B-212ENST00000494000 ANO2Q9NQ90 1003 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 CASZ1Q86V15 1759 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 FAM177BA6PVY3 158 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 GYS1P13807 737 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 ARID4AP29374 1257 aaPredicted RBP8□□□□□ -1.13
FNDC3B-212ENST00000494000 NFIXQ14938 502 aa8□□□□□ -1.13
FNDC3B-212ENST00000494000 TMX4Q9H1E5 349 aaPredicted RBP8□□□□□ -1.13
FNDC3B-212ENST00000494000 GNL3LQ9NVN8 582 aaKnown RBP8□□□□□ -1.13
FNDC3B-212ENST00000494000 CREB3O43889 395 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 RPS8P62241 208 aaKnown RBP7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 SF3B2Q13435 895 aaKnown RBP7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 RNF20Q5VTR2 975 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 BICDL1Q6ZP65 573 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 TFCP2L1Q9NZI6 479 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 RGS17Q9UGC6 210 aaPredicted RBP7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 HSPA4P34932 840 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 KRBA2Q6ZNG9 492 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 PROM2Q8N271 834 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 CCDC85AQ96PX6 553 aaPredicted RBP7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 HMG20BQ9P0W2 317 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 SERPINB2P05120 415 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 MCMDC2Q4G0Z9 681 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 POTEAQ6S8J7 498 aa7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 CWC27Q6UX04 472 aaKnown RBP7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 RBM17Q96I25 401 aaKnown RBP7.99□□□□□ -1.13
FNDC3B-212ENST00000494000 PDS5AQ29RF7 1337 aaKnown RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 NRXN2Q9P2S2 1712 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 RNF113AO15541 343 aaKnown RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 APPP05067 770 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 ZKSCAN1P17029 563 aaPredicted RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 BAG6P46379 1132 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 CHRNDQ07001 517 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 GRAPQ13588 217 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 GRAPLQ8TC17 118 aaPredicted RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 KCNB2Q92953 911 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 LSG1Q9H089 658 aaKnown RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 SEC31BQ9NQW1 1179 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 A0A1B0GUL6 1792 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 MED23Q9ULK4 1368 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 BBOX1O75936 387 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 NMIQ13287 307 aaPredicted RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 KRT32Q14532 448 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 CAVIN4Q5BKX8 364 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 RPGRQ92834 1020 aaKnown RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 CRAMP1Q96RY5 1269 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 KIF2CQ99661 725 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 TM6SF1Q9BZW5 370 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 STK32BQ9NY57 414 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 LEMD3Q9Y2U8 911 aa7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 U3KPZ7 1027 aaPredicted RBP7.98□□□□□ -1.13
FNDC3B-212ENST00000494000 CCDC171Q6TFL3 1326 aa7.97□□□□□ -1.13
FNDC3B-212ENST00000494000 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
FNDC3B-212ENST00000494000 GOLIM4O00461 696 aa7.97□□□□□ -1.13
FNDC3B-212ENST00000494000 PSMA5P28066 241 aa7.97□□□□□ -1.13
FNDC3B-212ENST00000494000 HOXA10P31260 410 aaPredicted RBP7.97□□□□□ -1.13
FNDC3B-212ENST00000494000 MCM6Q14566 821 aa7.97□□□□□ -1.13
FNDC3B-212ENST00000494000 CRY2Q49AN0 593 aa7.97□□□□□ -1.13
FNDC3B-212ENST00000494000 ZMYM1Q5SVZ6 1142 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms