RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DOK7Q18PE1 504 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 STRIP1Q5VSL9 837 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 TMED8Q6PL24 325 aaPredicted RBP18.14■□□□□ 0.49
ACTB-213ENST00000493945 USP17L1Q7RTZ2 530 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 SLC51AQ86UW1 340 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 TXNRD3Q86VQ6 643 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 SPATA5Q8NB90 893 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 MAST3O60307 1309 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 MMP14P50281 582 aa18.13■□□□□ 0.49
ACTB-213ENST00000493945 FKBP1AP62942 108 aaKnown RBP18.13■□□□□ 0.49
ACTB-213ENST00000493945 CHAF1AQ13111 956 aaPredicted RBP18.13■□□□□ 0.49
ACTB-213ENST00000493945 TTLL5Q6EMB2 1281 aa18.13■□□□□ 0.49
ACTB-213ENST00000493945 PLEKHM2Q8IWE5 1019 aa18.13■□□□□ 0.49
ACTB-213ENST00000493945 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
ACTB-213ENST00000493945 DNAJC2Q99543 621 aaKnown RBP18.13■□□□□ 0.49
ACTB-213ENST00000493945 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.13■□□□□ 0.49
ACTB-213ENST00000493945 SUGT1Q9Y2Z0 365 aa18.13■□□□□ 0.49
ACTB-213ENST00000493945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.13■□□□□ 0.49
ACTB-213ENST00000493945 RGS3P49796 1198 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 RASGRF1Q13972 1273 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 C9orf131Q5VYM1 1079 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 CIAPIN1Q6FI81 312 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 DPY19L2Q6NUT2 758 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 HAUS7Q99871 368 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 FAM205AQ6ZU69 1335 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 SALL3Q9BXA9 1300 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 SALL1Q9NSC2 1324 aa18.12■□□□□ 0.49
ACTB-213ENST00000493945 GTF2IP78347 998 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 ZSCAN25Q6NSZ9 544 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 TICAM2Q86XR7 235 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 SLF2Q8IX21 1173 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
ACTB-213ENST00000493945 BOLA2Q9H3K6 86 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 PAG1Q9NWQ8 432 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 IQSEC3Q9UPP2 1182 aaPredicted RBP18.11■□□□□ 0.49
ACTB-213ENST00000493945 MAST2Q6P0Q8 1798 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
ACTB-213ENST00000493945 TRIM6-TRIM34B2RNG4 842 aa18.1■□□□□ 0.49
ACTB-213ENST00000493945 RPS12P25398 132 aaKnown RBP18.1■□□□□ 0.49
ACTB-213ENST00000493945 MCAMP43121 646 aa18.1■□□□□ 0.49
ACTB-213ENST00000493945 MFSD14BQ5SR56 506 aa18.1■□□□□ 0.49
ACTB-213ENST00000493945 EVI5LQ96CN4 794 aa18.1■□□□□ 0.49
ACTB-213ENST00000493945 HMG20BQ9P0W2 317 aa18.1■□□□□ 0.49
ACTB-213ENST00000493945 HDAC9Q9UKV0 1011 aa18.1■□□□□ 0.49
ACTB-213ENST00000493945 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
ACTB-213ENST00000493945 WTIPA6NIX2 430 aaPredicted RBP18.09■□□□□ 0.49
ACTB-213ENST00000493945 FZD9O00144 591 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 MAP3K12Q12852 859 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 TTC22Q5TAA0 569 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 ERICH6Q7L0X2 663 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 DZIP1Q86YF9 867 aaKnown RBP18.09■□□□□ 0.49
ACTB-213ENST00000493945 PI4K2BQ8TCG2 481 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
ACTB-213ENST00000493945 LRP2BPQ9P2M1 347 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 ABCF2Q9UG63 623 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 MYH7P12883 1935 aa18.09■□□□□ 0.49
ACTB-213ENST00000493945 SCN9AQ15858 1988 aa18.08■□□□□ 0.49
ACTB-213ENST00000493945 RFX7Q2KHR2 1363 aa18.08■□□□□ 0.49
ACTB-213ENST00000493945 HIP1O00291 1037 aa18.08■□□□□ 0.48
ACTB-213ENST00000493945 LDHBP07195 334 aaKnown RBP18.08■□□□□ 0.48
ACTB-213ENST00000493945 PDE4AP27815 886 aa18.08■□□□□ 0.48
ACTB-213ENST00000493945 GSTO1P78417 241 aa18.08■□□□□ 0.48
ACTB-213ENST00000493945 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
ACTB-213ENST00000493945 GPC2Q8N158 579 aa18.08■□□□□ 0.48
ACTB-213ENST00000493945 OGFOD1Q8N543 542 aa18.08■□□□□ 0.48
ACTB-213ENST00000493945 AGBL3Q8NEM8 1001 aa18.08■□□□□ 0.48
ACTB-213ENST00000493945 DOCK2Q92608 1830 aa18.07■□□□□ 0.48
ACTB-213ENST00000493945 GOLIM4O00461 696 aa18.07■□□□□ 0.48
ACTB-213ENST00000493945 RAD17O75943 681 aa18.07■□□□□ 0.48
ACTB-213ENST00000493945 ZFYP08048 801 aaPredicted RBP18.07■□□□□ 0.48
ACTB-213ENST00000493945 ZAP70P43403 619 aa18.07■□□□□ 0.48
ACTB-213ENST00000493945 RSBN1LQ6PCB5 846 aaPredicted RBP18.07■□□□□ 0.48
ACTB-213ENST00000493945 NOL10Q9BSC4 688 aaKnown RBP18.07■□□□□ 0.48
ACTB-213ENST00000493945 FSD1Q9BTV5 496 aa18.07■□□□□ 0.48
ACTB-213ENST00000493945 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
ACTB-213ENST00000493945 LDHCP07864 332 aa18.06■□□□□ 0.48
ACTB-213ENST00000493945 LMOD1P29536 600 aaPredicted RBP18.06■□□□□ 0.48
ACTB-213ENST00000493945 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
ACTB-213ENST00000493945 TSHZ3Q63HK5 1081 aa18.06■□□□□ 0.48
ACTB-213ENST00000493945 CERS3Q8IU89 383 aa18.06■□□□□ 0.48
ACTB-213ENST00000493945 RILPL2Q969X0 211 aa18.06■□□□□ 0.48
ACTB-213ENST00000493945 SNRKQ9NRH2 765 aa18.06■□□□□ 0.48
ACTB-213ENST00000493945 RAI14Q9P0K7 980 aa18.06■□□□□ 0.48
ACTB-213ENST00000493945 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
ACTB-213ENST00000493945 YDJCA8MPS7 323 aa18.05■□□□□ 0.48
ACTB-213ENST00000493945 PSMD14O00487 310 aa18.05■□□□□ 0.48
ACTB-213ENST00000493945 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
ACTB-213ENST00000493945 VIL1P09327 827 aaKnown RBP18.05■□□□□ 0.48
ACTB-213ENST00000493945 CXCL9Q07325 125 aa18.05■□□□□ 0.48
ACTB-213ENST00000493945 DACT2Q5SW24 774 aa18.05■□□□□ 0.48
ACTB-213ENST00000493945 KBTBD3Q8NAB2 608 aa18.05■□□□□ 0.48
ACTB-213ENST00000493945 GJA3Q9Y6H8 435 aa18.05■□□□□ 0.48
ACTB-213ENST00000493945 COL4A5P29400 1685 aa18.05■□□□□ 0.48
ACTB-213ENST00000493945 GOLGB1Q14789 3259 aaKnown RBP18.04■□□□□ 0.48
ACTB-213ENST00000493945 SCARF1Q14162 830 aa18.04■□□□□ 0.48
ACTB-213ENST00000493945 CYP2E1P05181 493 aaPredicted RBP18.03■□□□□ 0.48
ACTB-213ENST00000493945 PI16Q6UXB8 463 aa18.03■□□□□ 0.48
ACTB-213ENST00000493945 DPF2Q92785 391 aa18.03■□□□□ 0.48
ACTB-213ENST00000493945 JAG2Q9Y219 1238 aa18.03■□□□□ 0.48
ACTB-213ENST00000493945 IQCA1LA6NCM1 817 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms