RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 LIG3P49916 1009 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 KCNQ4P56696 695 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 RASA3Q14644 834 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 SLITRK4Q8IW52 837 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 OR13H1Q8NG92 308 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 TRIM56Q9BRZ2 755 aaKnown RBP6.3□□□□□ -1.4
GTF3A-208ENST00000493903 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 LIN7BQ9HAP6 207 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 SALL4Q9UJQ4 1053 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 HCN2Q9UL51 889 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 ATXN7L1Q9ULK2 861 aaPredicted RBP6.3□□□□□ -1.4
GTF3A-208ENST00000493903 PHF24Q9UPV7 400 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 PCDHGC4Q9Y5F7 938 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 MRVI1Q9Y6F6 885 aa6.3□□□□□ -1.4
GTF3A-208ENST00000493903 PPP1R12AO14974 1030 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-208ENST00000493903 KHNYNO15037 678 aaKnown RBP6.29□□□□□ -1.4
GTF3A-208ENST00000493903 DNAJC6O75061 913 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 ADAMTS2O95450 1211 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 MX2P20592 715 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 RPS26P62854 115 aaKnown RBP6.29□□□□□ -1.4
GTF3A-208ENST00000493903 SRSF11Q05519 484 aaKnown RBP6.29□□□□□ -1.4
GTF3A-208ENST00000493903 APOBRQ0VD83 1088 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 CCDC84Q86UT8 332 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-208ENST00000493903 ZSCAN1Q8NBB4 408 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 NKD1Q969G9 470 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 SLKQ9H2G2 1235 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-208ENST00000493903 SPC25Q9HBM1 224 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 BRD7Q9NPI1 651 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 IFT57Q9NWB7 429 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 AKAP2Q9Y2D5 859 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 MSRB2Q9Y3D2 182 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
GTF3A-208ENST00000493903 PF4P02776 101 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 SLURP2P0DP57 97 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 MAPTP10636 758 aaKnown RBP6.28□□□□□ -1.4
GTF3A-208ENST00000493903 FGFR3P22607 806 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 TNP2Q05952 138 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 CAMK2GQ13555 558 aaPredicted RBP6.28□□□□□ -1.4
GTF3A-208ENST00000493903 GRIN2CQ14957 1233 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 SNAP47Q5SQN1 464 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 AGMOQ6ZNB7 445 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 NOL8Q76FK4 1167 aaKnown RBP6.28□□□□□ -1.4
GTF3A-208ENST00000493903 FILIP1Q7Z7B0 1213 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 CCNJLQ8IV13 435 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 HNRNPLLQ8WVV9 542 aaKnown RBP6.28□□□□□ -1.4
GTF3A-208ENST00000493903 ANAPC16Q96DE5 110 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 TCF12Q99081 682 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 LRRC3Q9BY71 257 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 LATS2Q9NRM7 1088 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 KCNH4Q9UQ05 1017 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 IGF1RP08069 1367 aa6.28□□□□□ -1.4
GTF3A-208ENST00000493903 KIF4AO95239 1232 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 CYP2E1P05181 493 aaPredicted RBP6.27□□□□□ -1.41
GTF3A-208ENST00000493903 FAM157BP0CG42 384 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 CD33P20138 364 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 SOX18P35713 384 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 CHMP4BP1P59074 171 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 CTBSQ01459 385 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 CCINQ13939 588 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 ARSHQ5FYA8 562 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 RPS26P11Q5JNZ5 115 aaPredicted RBP6.27□□□□□ -1.41
GTF3A-208ENST00000493903 FAM196AQ6ZSG2 479 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 GOLM1Q8NBJ4 401 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 OR6P1Q8NGX9 317 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 TRPM4Q8TD43 1214 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 WHAMMQ8TF30 809 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 SHDQ96IW2 340 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 EFCC1Q9HA90 598 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 PCDH12Q9NPG4 1184 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 STRN4Q9NRL3 753 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 UBP1Q9NZI7 540 aa6.27□□□□□ -1.41
GTF3A-208ENST00000493903 FAM221BA6H8Z2 402 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 F6X3S4 739 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 C2CD2LO14523 706 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 CDC45O75419 566 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 SASH3O75995 380 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 HOXD8P13378 290 aaPredicted RBP6.26□□□□□ -1.41
GTF3A-208ENST00000493903 ITPKAP23677 461 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 FAM160A1Q05DH4 1040 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 TAF7LQ5H9L4 462 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 DIEXFQ68CQ4 756 aaKnown RBP6.26□□□□□ -1.41
GTF3A-208ENST00000493903 TPTE2Q6XPS3 522 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 APPBP2Q92624 585 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 KANSL3Q9P2N6 904 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 TLR6Q9Y2C9 796 aa6.26□□□□□ -1.41
GTF3A-208ENST00000493903 SMAD7O15105 426 aaKnown RBP6.25□□□□□ -1.41
GTF3A-208ENST00000493903 EFSO43281 561 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 MMP20O60882 483 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 FBXO24O75426 580 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 CELA3AP09093 270 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 BMP4P12644 408 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 TFE3P19532 575 aaPredicted RBP6.25□□□□□ -1.41
GTF3A-208ENST00000493903 HYAL2Q12891 473 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 IFRD2Q12894 506 aaPredicted RBP6.25□□□□□ -1.41
GTF3A-208ENST00000493903 CCDC181Q5TID7 509 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 ZNF385CQ66K41 422 aaPredicted RBP6.25□□□□□ -1.41
GTF3A-208ENST00000493903 TTBK2Q6IQ55 1244 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 HOMER1Q86YM7 354 aa6.25□□□□□ -1.41
GTF3A-208ENST00000493903 TRIM42Q8IWZ5 723 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms