RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 A0A096LPE4 126 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 A0A1W2PPZ6 126 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
CD46-217ENST00000493796 SOX1O00570 391 aaPredicted RBP6.91□□□□□ -1.3
CD46-217ENST00000493796 FURINP09958 794 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 GRIA4P48058 902 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 IKBKEQ14164 716 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 SUZ12Q15022 739 aaKnown RBP6.91□□□□□ -1.3
CD46-217ENST00000493796 HGSNATQ68CP4 663 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.36e-12■■■■■ 26.9
CD46-217ENST00000493796 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.91□□□□□ -1.3
CD46-217ENST00000493796 SLC7A3Q8WY07 619 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 SSBP4Q9BWG4 385 aaPredicted RBP6.91□□□□□ -1.3
CD46-217ENST00000493796 AKTIPQ9H8T0 292 aa6.91□□□□□ -1.3
CD46-217ENST00000493796 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
CD46-217ENST00000493796 ADAM11O75078 769 aa6.9□□□□□ -1.3
CD46-217ENST00000493796 ALX3O95076 343 aa6.9□□□□□ -1.3
CD46-217ENST00000493796 WISP1O95388 367 aa6.9□□□□□ -1.3
CD46-217ENST00000493796 ESRRAP11474 423 aaPredicted RBP6.9□□□□□ -1.3
CD46-217ENST00000493796 ARL4DP49703 201 aa6.9□□□□□ -1.3
CD46-217ENST00000493796 FMR1Q06787 632 aaKnown RBP eCLIP6.9□□□□□ -1.3
CD46-217ENST00000493796 C19orf57Q0VDD7 668 aa6.9□□□□□ -1.3
CD46-217ENST00000493796 ENOX2Q16206 610 aaKnown RBP6.9□□□□□ -1.3
CD46-217ENST00000493796 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
CD46-217ENST00000493796 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
CD46-217ENST00000493796 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
CD46-217ENST00000493796 PNMA6FA0A0J9YX94 578 aa6.89□□□□□ -1.31
CD46-217ENST00000493796 GADD45BO75293 160 aaPredicted RBP6.89□□□□□ -1.31
CD46-217ENST00000493796 RSPO4Q2I0M5 234 aaPredicted RBP6.89□□□□□ -1.31
CD46-217ENST00000493796 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
CD46-217ENST00000493796 PRPF40BQ6NWY9 871 aaKnown RBP6.89□□□□□ -1.31
CD46-217ENST00000493796 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
CD46-217ENST00000493796 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
CD46-217ENST00000493796 CLEC4MQ9H2X3 399 aaPredicted RBP6.89□□□□□ -1.31
CD46-217ENST00000493796 SOX17Q9H6I2 414 aaPredicted RBP6.89□□□□□ -1.31
CD46-217ENST00000493796 ADAM23O75077 832 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 ITPKAP23677 461 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 NLRP12P59046 1061 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 PCDH1Q08174 1060 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 GRM2Q14416 872 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 DUOXA2Q1HG44 320 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 PI16Q6UXB8 463 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 Q6ZS46 218 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 KIAA1211Q6ZU35 1233 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 AGGF1Q8N302 714 aaeCLIP6.88□□□□□ -1.31
CD46-217ENST00000493796 UBASH3BQ8TF42 649 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 ABCB6Q9NP58 842 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 TRAK1Q9UPV9 953 aa6.88□□□□□ -1.31
CD46-217ENST00000493796 K7ELQ4 463 aaPredicted RBP6.87□□□□□ -1.31
CD46-217ENST00000493796 MAPK8P45983 427 aa6.87□□□□□ -1.31
CD46-217ENST00000493796 PTPN12Q05209 780 aaKnown RBP6.87□□□□□ -1.31
CD46-217ENST00000493796 ZNF423Q2M1K9 1284 aa6.87□□□□□ -1.31
CD46-217ENST00000493796 DZIP1LQ8IYY4 767 aaKnown RBP6.87□□□□□ -1.31
CD46-217ENST00000493796 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
CD46-217ENST00000493796 TP53INP1Q96A56 240 aa6.87□□□□□ -1.31
CD46-217ENST00000493796 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
CD46-217ENST00000493796 NLRP2Q9NX02 1062 aa6.87□□□□□ -1.31
CD46-217ENST00000493796 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
CD46-217ENST00000493796 GLB1P16278 677 aa6.85□□□□□ -1.31
CD46-217ENST00000493796 GSTM4Q03013 218 aa6.85□□□□□ -1.31
CD46-217ENST00000493796 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
CD46-217ENST00000493796 FBF1Q8TES7 1133 aa6.85□□□□□ -1.31
CD46-217ENST00000493796 BCO2Q9BYV7 579 aa6.85□□□□□ -1.31
CD46-217ENST00000493796 DYRK3O43781 588 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
CD46-217ENST00000493796 B3GALT4O96024 378 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 P4HBP07237 508 aaKnown RBP6.84□□□□□ -1.31
CD46-217ENST00000493796 H2AFB1P0C5Y9 115 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 H2AFB2P0C5Z0 115 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 RPS26P11Q5JNZ5 115 aaPredicted RBP6.84□□□□□ -1.31
CD46-217ENST00000493796 ALG1LQ6GMV1 187 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 SETDB2Q96T68 719 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 RUSC1Q9BVN2 902 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 CEP41Q9BYV8 373 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 NRSN2Q9GZP1 204 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 SEMA6BQ9H3T3 888 aa6.84□□□□□ -1.31
CD46-217ENST00000493796 LOC100289279A0A1B0GTE1 492 aa6.83□□□□□ -1.32
CD46-217ENST00000493796 MEGF11A6BM72 1044 aa6.83□□□□□ -1.32
CD46-217ENST00000493796 UBL7Q96S82 380 aaPredicted RBP6.83□□□□□ -1.32
CD46-217ENST00000493796 USP26Q9BXU7 913 aa6.83□□□□□ -1.32
CD46-217ENST00000493796 RNF208Q9H0X6 261 aa6.83□□□□□ -1.32
CD46-217ENST00000493796 PPP4R2Q9NY27 417 aa6.83□□□□□ -1.32
CD46-217ENST00000493796 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
CD46-217ENST00000493796 ITGB7P26010 798 aa6.82□□□□□ -1.32
CD46-217ENST00000493796 FCGRTP55899 365 aa6.82□□□□□ -1.32
CD46-217ENST00000493796 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
CD46-217ENST00000493796 NXPE4Q6UWF7 544 aa6.82□□□□□ -1.32
CD46-217ENST00000493796 DTHD1Q6ZMT9 781 aa6.82□□□□□ -1.32
CD46-217ENST00000493796 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
CD46-217ENST00000493796 ANKRD33BA6NCL7 494 aa6.81□□□□□ -1.32
CD46-217ENST00000493796 DLGAP3O95886 979 aa6.81□□□□□ -1.32
CD46-217ENST00000493796 XRCC5P13010 732 aaKnown RBP6.81□□□□□ -1.32
CD46-217ENST00000493796 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
CD46-217ENST00000493796 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
CD46-217ENST00000493796 UVSSAQ2YD98 709 aa6.81□□□□□ -1.32
CD46-217ENST00000493796 ANKRD34AQ69YU3 496 aa6.81□□□□□ -1.32
CD46-217ENST00000493796 DDX54Q8TDD1 881 aaKnown RBP6.81□□□□□ -1.32
CD46-217ENST00000493796 FAM46AQ96IP4 442 aaKnown RBP6.81□□□□□ -1.32
CD46-217ENST00000493796 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
CD46-217ENST00000493796 TMPRSS13Q9BYE2 586 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms