RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
PTPN7-216ENST00000492977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
PTPN7-216ENST00000492977 RASGRF1Q13972 1273 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 SNAP23O00161 211 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 BCAMP50895 628 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 GSE1Q14687 1217 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 NFIXQ14938 502 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
PTPN7-216ENST00000492977 PUS7LQ9H0K6 701 aaKnown RBP16.72■□□□□ 0.27
PTPN7-216ENST00000492977 ZDHHC9Q9Y397 364 aa16.72■□□□□ 0.27
PTPN7-216ENST00000492977 A0A1B0GUL6 1792 aa16.71■□□□□ 0.27
PTPN7-216ENST00000492977 COL4A1P02462 1669 aa16.71■□□□□ 0.27
PTPN7-216ENST00000492977 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
PTPN7-216ENST00000492977 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
PTPN7-216ENST00000492977 PKP1Q13835 747 aa16.71■□□□□ 0.27
PTPN7-216ENST00000492977 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
PTPN7-216ENST00000492977 TAF1P21675 1872 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 ZNF804BA4D1E1 1349 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 NPHP1O15259 732 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 BRD1O95696 1058 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 PDE6AP16499 860 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 TM4SF1P30408 202 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 DEKP35659 375 aaKnown RBP16.7■□□□□ 0.26
PTPN7-216ENST00000492977 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 LARP6Q9BRS8 491 aaKnown RBP16.7■□□□□ 0.26
PTPN7-216ENST00000492977 ANKRD2Q9GZV1 360 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 DOCK2Q92608 1830 aa16.7■□□□□ 0.26
PTPN7-216ENST00000492977 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
PTPN7-216ENST00000492977 GPAA1O43292 621 aa16.69■□□□□ 0.26
PTPN7-216ENST00000492977 TRAK2O60296 914 aa16.69■□□□□ 0.26
PTPN7-216ENST00000492977 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
PTPN7-216ENST00000492977 ME3Q16798 604 aa16.69■□□□□ 0.26
PTPN7-216ENST00000492977 CNBD1Q8NA66 436 aa16.69■□□□□ 0.26
PTPN7-216ENST00000492977 TPCN1Q9ULQ1 816 aa16.69■□□□□ 0.26
PTPN7-216ENST00000492977 ZNF532Q9HCE3 1301 aa16.69■□□□□ 0.26
PTPN7-216ENST00000492977 MYO5AQ9Y4I1 1855 aaKnown RBP16.68■□□□□ 0.26
PTPN7-216ENST00000492977 FOXP2O15409 715 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 LARGE1O95461 756 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 GYS1P13807 737 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 TXNRD1Q16881 649 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 IMMTQ16891 758 aaKnown RBP16.68■□□□□ 0.26
PTPN7-216ENST00000492977 SKOR2Q2VWA4 1001 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-216ENST00000492977 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
PTPN7-216ENST00000492977 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 E7EWF7 191 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 PLSCR1O15162 318 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 FGAP02671 866 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 PDIA4P13667 645 aaKnown RBP16.68■□□□□ 0.26
PTPN7-216ENST00000492977 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-216ENST00000492977 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
PTPN7-216ENST00000492977 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
PTPN7-216ENST00000492977 LAMA4Q16363 1823 aa16.66■□□□□ 0.26
PTPN7-216ENST00000492977 SEMA3EO15041 775 aa16.66■□□□□ 0.26
PTPN7-216ENST00000492977 EXOSC10Q01780 885 aaKnown RBP16.66■□□□□ 0.26
PTPN7-216ENST00000492977 CCDC24Q8N4L8 307 aa16.66■□□□□ 0.26
PTPN7-216ENST00000492977 TCEANC2Q96MN5 208 aa16.66■□□□□ 0.26
PTPN7-216ENST00000492977 GYG1P46976 350 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 ALX1Q15699 326 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 PRR5LQ6MZQ0 368 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 Q6ZUG5 572 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 FBXO33Q7Z6M2 555 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 VPS37DQ86XT2 251 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 FBXL16Q8N461 479 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
PTPN7-216ENST00000492977 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
PTPN7-216ENST00000492977 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
PTPN7-216ENST00000492977 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
PTPN7-216ENST00000492977 ZNF213O14771 459 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 SERPINB2P05120 415 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 RXRBP28702 533 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 ST5P78524 1137 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 ST3GAL1Q11201 340 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 GRAPQ13588 217 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 GRAPLQ8TC17 118 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-216ENST00000492977 AGXT2Q9BYV1 514 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 LRP2BPQ9P2M1 347 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 ZMYM6O95789 1325 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 PDS5AQ29RF7 1337 aaKnown RBP16.64■□□□□ 0.25
PTPN7-216ENST00000492977 GJB2P29033 226 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 FGD1P98174 961 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
PTPN7-216ENST00000492977 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
PTPN7-216ENST00000492977 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
PTPN7-216ENST00000492977 STX6O43752 255 aa16.63■□□□□ 0.25
PTPN7-216ENST00000492977 GNAT2P19087 354 aa16.63■□□□□ 0.25
PTPN7-216ENST00000492977 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
PTPN7-216ENST00000492977 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-216ENST00000492977 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-216ENST00000492977 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
PTPN7-216ENST00000492977 APBA3O96018 575 aa16.62■□□□□ 0.25
PTPN7-216ENST00000492977 SYT1P21579 422 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms