RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PNMA5Q96PV4 448 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 ZFAND3Q9H8U3 227 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 SCAPERQ9BY12 1400 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 A6NHS1 94 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 SETDB2Q96T68 719 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 ZFYVE1Q9HBF4 777 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 TIMMDC1Q9NPL8 285 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 SHANK3Q9BYB0 1731 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 TNFRSF21O75509 655 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 TXLNAP40222 546 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 LRRC69Q6ZNQ3 347 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 CDAN1Q8IWY9 1227 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 GGNBP2Q9H3C7 697 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 PCDHGB7Q9Y5F8 929 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 EFCAB6Q5THR3 1501 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 KIAA1107Q9UPP5 1409 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 TNRQ92752 1358 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 IBSPP21815 317 aaPredicted RBP4.33□□□□□ -1.72
SNX13-209ENST00000492626 NEUROD1Q13562 356 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 NFE2L2Q16236 605 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 TAF7LQ5H9L4 462 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 METTL16Q86W50 562 aaKnown RBP4.33□□□□□ -1.72
SNX13-209ENST00000492626 INSM2Q96T92 566 aaPredicted RBP4.33□□□□□ -1.72
SNX13-209ENST00000492626 EHD4Q9H223 541 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 TMEM131LA2VDJ0 1609 aa4.33□□□□□ -1.72
SNX13-209ENST00000492626 PITPNM2Q9BZ72 1349 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 A0A1B0GTH6 734 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 FAM177BA6PVY3 158 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 RAD51AP2Q09MP3 1159 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 SPRYD7Q5W111 196 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 Q6ZVU0 165 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 PRICKLE2Q7Z3G6 844 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 HSH2DQ96JZ2 352 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 SPACA7Q96KW9 195 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 TINF2Q9BSI4 451 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 SPON2Q9BUD6 331 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 XYLBO75191 536 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 LYSMD3Q7Z3D4 306 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 ZNF598Q86UK7 904 aaKnown RBP4.32□□□□□ -1.72
SNX13-209ENST00000492626 GPRASP2Q96D09 838 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 TRIM55Q9BYV6 548 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 ZFYVE28Q9HCC9 887 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 PRAG1Q86YV5 1406 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 CCDC85BQ15834 202 aaPredicted RBP4.32□□□□□ -1.72
SNX13-209ENST00000492626 BTLAQ7Z6A9 289 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 ABI2Q9NYB9 513 aaPredicted RBP4.32□□□□□ -1.72
SNX13-209ENST00000492626 AKAP2Q9Y2D5 859 aa4.32□□□□□ -1.72
SNX13-209ENST00000492626 CAPN5O15484 640 aaPredicted RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 TNNI2P48788 182 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 MEIOBQ8N635 442 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 LNPKQ9C0E8 428 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 NPHS2Q9NP85 383 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 FOXD3Q9UJU5 478 aaPredicted RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 BRWD3Q6RI45 1802 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 TET3O43151 1660 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 CICQ96RK0 1608 aaPredicted RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 XRCC5P13010 732 aaKnown RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 ST13P50502 369 aaKnown RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 ZNF394Q53GI3 561 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 C6orf118Q5T5N4 469 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 DTHD1Q6ZMT9 781 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 BCO2Q9BYV7 579 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 RNF19AQ9NV58 838 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 DDX41Q9UJV9 622 aaKnown RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 GBP2P32456 591 aaPredicted RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 RNF144AP50876 292 aaPredicted RBP4.31□□□□□ -1.72
SNX13-209ENST00000492626 POU4F2Q12837 409 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 NXPE4Q6UWF7 544 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 NLRP13Q86W25 1043 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 KIAA0825Q8IV33 1275 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 JMYQ8N9B5 988 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 ABCA3Q99758 1704 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 SUV39H2Q9H5I1 410 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 MSH6P52701 1360 aa4.31□□□□□ -1.72
SNX13-209ENST00000492626 POLR3DP05423 398 aaPredicted RBP4.3□□□□□ -1.72
SNX13-209ENST00000492626 RGS19P49795 217 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 WDR44Q5JSH3 913 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 NCAPG2Q86XI2 1143 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 EPS8L3Q8TE67 593 aaKnown RBP4.3□□□□□ -1.72
SNX13-209ENST00000492626 GRIP2Q9C0E4 1043 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 ARHGEF28Q8N1W1 1705 aaKnown RBP4.3□□□□□ -1.72
SNX13-209ENST00000492626 ARHGAP31Q2M1Z3 1444 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 PSAPP07602 524 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 CEP44Q9C0F1 390 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 TRPC5Q9UL62 973 aaPredicted RBP4.3□□□□□ -1.72
SNX13-209ENST00000492626 SAMM50Q9Y512 469 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 HRH3Q9Y5N1 445 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 USP31Q70CQ4 1352 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 TIMP2P16035 220 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 PAK2Q13177 524 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 FIGNL1Q6PIW4 674 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 XKR5Q6UX68 686 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 LINC00528Q8N1L1 170 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 OSBPL2Q9H1P3 480 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 GPAMQ9HCL2 828 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 ERVK-7P63135 1459 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 CDC42BPBQ9Y5S2 1711 aa4.3□□□□□ -1.72
SNX13-209ENST00000492626 A0A1W2PNR3 127 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 SPINT1O43278 529 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 IGHA2P01877 340 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms