RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 GRIK5Q16478 980 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 NBPF9Q3BBW0 867 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 USP48Q86UV5 1035 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 KIAA0825Q8IV33 1275 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 SSH3Q8TE77 659 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 LPIN2Q92539 896 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 AIDAQ96BJ3 306 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 ZBED3Q96IU2 234 aaPredicted RBP8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 YTHDC1Q96MU7 727 aaKnown RBP8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 CEP126Q9P2H0 1117 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 PCDHAC2Q9Y5I4 1007 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 ZNF646O15015 1829 aaPredicted RBP8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 FAM205AQ6ZU69 1335 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 ADORA1P30542 326 aa8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 TIMM10P62072 90 aa8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 TFCP2Q12800 502 aa8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 MVPQ14764 893 aaKnown RBP8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 ZBTB40Q9NUA8 1239 aa8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 COG6Q9Y2V7 657 aa8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 MYO3BQ8WXR4 1341 aa8.94□□□□□ -0.98
PDLIM1-204ENST00000492511 TMEM88BA6NKF7 163 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 ADM5C9JUS6 153 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 WNT10BO00744 389 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 IFIT1P09914 478 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 MS4A1P11836 297 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 SLC5A1P13866 664 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 MMP14P50281 582 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 ATP2B3Q16720 1220 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 CAVIN4Q5BKX8 364 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 ANGEL2Q5VTE6 544 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 CEP85Q6P2H3 762 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 CDC37L1Q7L3B6 337 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 SIRT2Q8IXJ6 389 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 SCAF8Q9UPN6 1271 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 AOX1Q06278 1338 aa8.93□□□□□ -0.98
PDLIM1-204ENST00000492511 PSME4Q14997 1843 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 F8W031 263 aaPredicted RBP8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 PHKA1P46020 1223 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 CHAF1AQ13111 956 aaPredicted RBP8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 PDE3AQ14432 1141 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 MFSD14BQ5SR56 506 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 KRT26Q7Z3Y9 468 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 VPS37DQ86XT2 251 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 MTMR14Q8NCE2 650 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 DCPSQ96C86 337 aaKnown RBP8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 GGA3Q9NZ52 723 aa8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 NOP58Q9Y2X3 529 aaKnown RBP8.92□□□□□ -0.98
PDLIM1-204ENST00000492511 COL1A1P02452 1464 aaPredicted RBP8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 A0A1B0GUL7 405 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 ZBTB22O15209 634 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 CELF2O95319 508 aaKnown RBP8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 G3BP1Q13283 466 aaKnown RBP eCLIP8.91□□□□□ -0.981e-8■■■■□ 20.1
PDLIM1-204ENST00000492511 CFAP100Q494V2 611 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 XAGE2Q96GT9 111 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 PRMT6Q96LA8 375 aaPredicted RBP8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 PRDM10Q9NQV6 1147 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 MKRN1Q9UHC7 482 aaKnown RBP8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 HDAC9Q9UKV0 1011 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 DDX19BQ9UMR2 479 aa8.91□□□□□ -0.98
PDLIM1-204ENST00000492511 CNTNAP1P78357 1384 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 PITPNM2Q9BZ72 1349 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 SPDYE2BA6NHP3 402 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 RASSF10A6NK89 507 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 SURF6O75683 361 aaKnown RBP8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 SPDYE6P0CI01 402 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 CTCFP49711 727 aaPredicted RBP8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 VEGFBP49765 207 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 DLGAP5Q15398 846 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 PRAMEF18Q5VWM3 479 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 TTF2Q9UNY4 1162 aaKnown RBP8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 AKAP2Q9Y2D5 859 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 TLL2Q9Y6L7 1015 aa8.9□□□□□ -0.98
PDLIM1-204ENST00000492511 FRAT2O75474 233 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 SAPCD2Q86UD0 394 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 SULF1Q8IWU6 871 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 RPAP2Q8IXW5 612 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 TBC1D22AQ8WUA7 517 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 CDCA5Q96FF9 252 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 NEUROD6Q96NK8 337 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 ZNF408Q9H9D4 720 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 GPR108Q9NPR9 543 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 SERPINA10Q9UK55 444 aa8.89□□□□□ -0.99
PDLIM1-204ENST00000492511 CLRN2A0PK11 232 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 CRKP46108 304 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 RRP1P56182 461 aaKnown RBP8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 HDLBPQ00341 1268 aaKnown RBP8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 RASGRF1Q13972 1273 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 DEFB115Q30KQ5 88 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 TNNI3KQ59H18 835 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 APOBEC3HQ6NTF7 200 aaKnown RBP8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 WDR66Q8TBY9 1149 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 EAF2Q96CJ1 260 aaPredicted RBP8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 DBNDD2Q9BQY9 259 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 MRIQ9BWK5 157 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms