RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 ANP32CO43423 234 aa20.13■□□□□ 0.81
CDK11A-220ENST00000492390 NBPF12Q5TAG4 269 aaPredicted RBP20.13■□□□□ 0.81
CDK11A-220ENST00000492390 GREM2Q9H772 168 aa20.13■□□□□ 0.81
CDK11A-220ENST00000492390 RBM27Q9P2N5 1060 aaKnown RBP20.13■□□□□ 0.81
CDK11A-220ENST00000492390 TRIM35Q9UPQ4 493 aa20.13■□□□□ 0.81
CDK11A-220ENST00000492390 TAF1CQ15572 869 aaPredicted RBP20.12■□□□□ 0.81
CDK11A-220ENST00000492390 OPTNQ96CV9 577 aa20.12■□□□□ 0.81
CDK11A-220ENST00000492390 MS4A4AQ96JQ5 239 aa20.12■□□□□ 0.81
CDK11A-220ENST00000492390 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
CDK11A-220ENST00000492390 IGHMBP2P38935 993 aaKnown RBP20.11■□□□□ 0.81
CDK11A-220ENST00000492390 SPDYE2BA6NHP3 402 aa20.1■□□□□ 0.81
CDK11A-220ENST00000492390 DDX58O95786 925 aaKnown RBP20.1■□□□□ 0.81
CDK11A-220ENST00000492390 SPDYE6P0CI01 402 aa20.1■□□□□ 0.81
CDK11A-220ENST00000492390 KLRK1P26718 216 aa20.1■□□□□ 0.81
CDK11A-220ENST00000492390 DPF3Q92784 378 aa20.1■□□□□ 0.81
CDK11A-220ENST00000492390 CD209Q9NNX6 404 aa20.1■□□□□ 0.81
CDK11A-220ENST00000492390 CLRN2A0PK11 232 aa20.09■□□□□ 0.81
CDK11A-220ENST00000492390 MYCP01106 439 aaPredicted RBP20.09■□□□□ 0.81
CDK11A-220ENST00000492390 CFAP100Q494V2 611 aa20.09■□□□□ 0.81
CDK11A-220ENST00000492390 CERS5Q8N5B7 392 aa20.09■□□□□ 0.81
CDK11A-220ENST00000492390 SH3TC2Q8TF17 1288 aa20.09■□□□□ 0.81
CDK11A-220ENST00000492390 BRI3BPQ8WY22 251 aa20.09■□□□□ 0.81
CDK11A-220ENST00000492390 PRMT6Q96LA8 375 aaPredicted RBP20.09■□□□□ 0.81
CDK11A-220ENST00000492390 ELP3Q9H9T3 547 aa20.09■□□□□ 0.81
CDK11A-220ENST00000492390 VEZTQ9HBM0 779 aa20.09■□□□□ 0.81
CDK11A-220ENST00000492390 WDHD1O75717 1129 aaPredicted RBP20.08■□□□□ 0.81
CDK11A-220ENST00000492390 GNRH1P01148 92 aa20.08■□□□□ 0.81
CDK11A-220ENST00000492390 GTF2A2P52657 109 aa20.08■□□□□ 0.81
CDK11A-220ENST00000492390 RASA3Q14644 834 aa20.08■□□□□ 0.81
CDK11A-220ENST00000492390 MBIPQ9NS73 344 aa20.08■□□□□ 0.81
CDK11A-220ENST00000492390 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.81
CDK11A-220ENST00000492390 ECM29Q5VYK3 1845 aa20.08■□□□□ 0.8
CDK11A-220ENST00000492390 CCL15-CCL14A0A0B4J2E2 113 aa20.07■□□□□ 0.8
CDK11A-220ENST00000492390 PRMT2P55345 433 aa20.07■□□□□ 0.8
CDK11A-220ENST00000492390 KIF22Q14807 665 aa20.07■□□□□ 0.8
CDK11A-220ENST00000492390 CCL15Q16663 113 aa20.07■□□□□ 0.8
CDK11A-220ENST00000492390 PRO3102Q9H379 93 aa20.07■□□□□ 0.8
CDK11A-220ENST00000492390 SPEF2Q9C093 1822 aa20.06■□□□□ 0.8
CDK11A-220ENST00000492390 KCNJ4P48050 445 aa20.06■□□□□ 0.8
CDK11A-220ENST00000492390 FKBP1AP62942 108 aaKnown RBP20.06■□□□□ 0.8
CDK11A-220ENST00000492390 TNFAIP1Q13829 316 aa20.06■□□□□ 0.8
CDK11A-220ENST00000492390 CCDC146Q8IYE0 955 aa20.06■□□□□ 0.8
CDK11A-220ENST00000492390 NKX2-3Q8TAU0 364 aa20.06■□□□□ 0.8
CDK11A-220ENST00000492390 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
CDK11A-220ENST00000492390 MAP3K2Q9Y2U5 619 aa20.06■□□□□ 0.8
CDK11A-220ENST00000492390 F8W031 263 aaPredicted RBP20.05■□□□□ 0.8
CDK11A-220ENST00000492390 TLR2O60603 784 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 C15orf52Q6ZUT6 534 aaKnown RBP20.05■□□□□ 0.8
CDK11A-220ENST00000492390 FAM43AQ8N2R8 423 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 SHISA4Q96DD7 197 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 HTATIP2Q9BUP3 242 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 CHMP4AQ9BY43 222 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
CDK11A-220ENST00000492390 MYH3P11055 1940 aa20.05■□□□□ 0.8
CDK11A-220ENST00000492390 RANBP2P49792 3224 aaKnown RBP20.04■□□□□ 0.8
CDK11A-220ENST00000492390 LACTBP83111 547 aaPredicted RBP20.04■□□□□ 0.8
CDK11A-220ENST00000492390 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.04■□□□□ 0.8
CDK11A-220ENST00000492390 ZCCHC17Q9NP64 241 aaKnown RBP20.04■□□□□ 0.8
CDK11A-220ENST00000492390 A0A1W2PPC1 479 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 ZNF853P0CG23 659 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 ITGA6P23229 1130 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 MAP3K9P80192 1104 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 KSR2Q6VAB6 950 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 CNKSR2Q8WXI2 1034 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 ARHGAP39Q9C0H5 1083 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 NR2E3Q9Y5X4 410 aa20.03■□□□□ 0.8
CDK11A-220ENST00000492390 AOX1Q06278 1338 aa20.02■□□□□ 0.8
CDK11A-220ENST00000492390 IRS2Q9Y4H2 1338 aa20.02■□□□□ 0.8
CDK11A-220ENST00000492390 CUL9Q8IWT3 2517 aa20.02■□□□□ 0.8
CDK11A-220ENST00000492390 ELL2O00472 640 aaPredicted RBP20.02■□□□□ 0.8
CDK11A-220ENST00000492390 IL1R1P14778 569 aa20.02■□□□□ 0.8
CDK11A-220ENST00000492390 RBM5P52756 815 aaKnown RBP eCLIP20.02■□□□□ 0.8
CDK11A-220ENST00000492390 CHRNDQ07001 517 aa20.02■□□□□ 0.8
CDK11A-220ENST00000492390 NEXNQ0ZGT2 675 aa20.02■□□□□ 0.8
CDK11A-220ENST00000492390 OTOFQ9HC10 1997 aa20.02■□□□□ 0.8
CDK11A-220ENST00000492390 H7C1W4 665 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 VGLL4Q14135 290 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 MTFR1Q15390 333 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 CCDC30Q5VVM6 783 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 ZNF804AQ7Z570 1209 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 UBE2Q1Q7Z7E8 422 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 PLA2G12BQ9BX93 195 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 CSADQ9Y600 493 aa20.01■□□□□ 0.79
CDK11A-220ENST00000492390 PI4KAP2A4QPH2 592 aa20■□□□□ 0.79
CDK11A-220ENST00000492390 CETPP11597 493 aa20■□□□□ 0.79
CDK11A-220ENST00000492390 GJA8P48165 433 aa20■□□□□ 0.79
CDK11A-220ENST00000492390 MNX1P50219 401 aaPredicted RBP20■□□□□ 0.79
CDK11A-220ENST00000492390 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
CDK11A-220ENST00000492390 UBE3BQ7Z3V4 1068 aa20■□□□□ 0.79
CDK11A-220ENST00000492390 PI4KAP1Q8N8J0 262 aa20■□□□□ 0.79
CDK11A-220ENST00000492390 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20■□□□□ 0.79
CDK11A-220ENST00000492390 TEPSINQ96N21 525 aa20■□□□□ 0.79
CDK11A-220ENST00000492390 ZNF70Q9UC06 446 aaPredicted RBP20■□□□□ 0.79
CDK11A-220ENST00000492390 NEURL1BA8MQ27 555 aa19.99■□□□□ 0.79
CDK11A-220ENST00000492390 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
CDK11A-220ENST00000492390 GJB1P08034 283 aa19.99■□□□□ 0.79
CDK11A-220ENST00000492390 RALBP1Q15311 655 aa19.99■□□□□ 0.79
CDK11A-220ENST00000492390 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms