RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 TBC1D8O95759 1140 aa14.39□□□□□ -0.11
SRGAP3-210ENST00000491467 ATP5JP18859 108 aa14.39□□□□□ -0.11
SRGAP3-210ENST00000491467 HSPA4P34932 840 aa14.39□□□□□ -0.11
SRGAP3-210ENST00000491467 BCL2L12Q9HB09 334 aa14.39□□□□□ -0.11
SRGAP3-210ENST00000491467 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
SRGAP3-210ENST00000491467 DIAPH3Q9NSV4 1193 aa14.39□□□□□ -0.11
SRGAP3-210ENST00000491467 POLR2AP24928 1970 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 ERVV-1B6SEH8 477 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 NPHP1O15259 732 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 PCCAP05165 728 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 DEKP35659 375 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 IL15P40933 162 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 PIP4K2AP48426 406 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 NUCB2P80303 420 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 LMBR1LQ6UX01 489 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 DNAJC10Q8IXB1 793 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 MASTLQ96GX5 879 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 SNRKQ9NRH2 765 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 MAP3K15Q6ZN16 1313 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 CDHR2Q9BYE9 1310 aa14.38□□□□□ -0.11
SRGAP3-210ENST00000491467 DDX11L8A8MPP1 907 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 SRGNP10124 158 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 CYP19A1P11511 503 aaPredicted RBP14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 MCM4P33991 863 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 RAB3GAP1Q15042 981 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 CLEC17AQ6ZS10 378 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 CDC37L1Q7L3B6 337 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 C7orf43Q8WVR3 580 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 GBP4Q96PP9 640 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
SRGAP3-210ENST00000491467 CENPFP49454 3210 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 CD2BP2O95400 341 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 IL6STP40189 918 aaPredicted RBP14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 NEK4P51957 841 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 GSE1Q14687 1217 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 PRR5LQ6MZQ0 368 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 OLFM4Q6UX06 510 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 C2orf69Q8N8R5 385 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 ZBTB38Q8NAP3 1195 aaPredicted RBP14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 LSG1Q9H089 658 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 ZBTB3Q9H5J0 574 aa14.36□□□□□ -0.11
SRGAP3-210ENST00000491467 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
SRGAP3-210ENST00000491467 KCNB2Q92953 911 aa14.35□□□□□ -0.11
SRGAP3-210ENST00000491467 INTS4Q96HW7 963 aaKnown RBP14.35□□□□□ -0.11
SRGAP3-210ENST00000491467 TM6SF1Q9BZW5 370 aa14.35□□□□□ -0.11
SRGAP3-210ENST00000491467 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
SRGAP3-210ENST00000491467 SIL1Q9H173 461 aa14.35□□□□□ -0.11
SRGAP3-210ENST00000491467 MYH7P12883 1935 aa14.35□□□□□ -0.11
SRGAP3-210ENST00000491467 EYA2O00167 538 aa14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 MAP4K4O95819 1239 aaPredicted RBP14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 CSF1RP07333 972 aa14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 TFCP2Q12800 502 aa14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 FAM122AQ96E09 287 aa14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 AKAP2Q9Y2D5 859 aa14.34□□□□□ -0.11
SRGAP3-210ENST00000491467 GPR25O00155 361 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 SLC10A3P09131 477 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 HSP90B1P14625 803 aaKnown RBP14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 PLA2G5P39877 138 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 CUL4AQ13619 759 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 CCDC57Q2TAC2 916 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 SKOR2Q2VWA4 1001 aaPredicted RBP14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 USP48Q86UV5 1035 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 LRCH3Q96II8 777 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 GBA2Q9HCG7 927 aaPredicted RBP14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 RAPGEFL1Q9UHV5 662 aa14.33□□□□□ -0.12
SRGAP3-210ENST00000491467 LAMB2P55268 1798 aa14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 TBC1D9BQ66K14 1250 aa14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 DLK2Q6UY11 383 aa14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 ATG9AQ7Z3C6 839 aa14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 HAUS7Q99871 368 aa14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 GPRC5DQ9NZD1 345 aa14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 PGAP2Q9UHJ9 254 aa14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 RANBP2P49792 3224 aaKnown RBP14.32□□□□□ -0.12
SRGAP3-210ENST00000491467 GOLGA6L22H0YM25 854 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 SOX1O00570 391 aaPredicted RBP14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 RGL2O15211 777 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 FKTNO75072 461 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 ST5P78524 1137 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 LRRFIP1Q32MZ4 808 aaKnown RBP14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 KLHDC4Q8TBB5 520 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 JARID2Q92833 1246 aaPredicted RBP14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 MAP4K1Q92918 833 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 TNPO1Q92973 898 aaKnown RBP14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 FSD1Q9BTV5 496 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 TMEM106CQ9BVX2 250 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 BOLA2Q9H3K6 86 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 CEP126Q9P2H0 1117 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 DBNLQ9UJU6 430 aaKnown RBP14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 STXBP5LQ9Y2K9 1186 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 CHMP3Q9Y3E7 222 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 BRCA2P51587 3418 aa14.31□□□□□ -0.12
SRGAP3-210ENST00000491467 PDIA4P13667 645 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms