RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
SMPD4-219ENST00000491128 GPAA1O43292 621 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 UFL1O94874 794 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 CYP21A2P08686 494 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 SRGNP10124 158 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 ANAPC15P60006 121 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.68■□□□□ 0.262e-7■■■■□ 20.2
SMPD4-219ENST00000491128 ADGRA1Q86SQ6 560 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 APPBP2Q92624 585 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 RAI14Q9P0K7 980 aa16.68■□□□□ 0.26
SMPD4-219ENST00000491128 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
SMPD4-219ENST00000491128 ZKSCAN1P17029 563 aaPredicted RBP16.67■□□□□ 0.26
SMPD4-219ENST00000491128 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
SMPD4-219ENST00000491128 FBXO33Q7Z6M2 555 aa16.67■□□□□ 0.26
SMPD4-219ENST00000491128 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
SMPD4-219ENST00000491128 POLLQ9UGP5 575 aa16.67■□□□□ 0.26
SMPD4-219ENST00000491128 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
SMPD4-219ENST00000491128 TCRBV5S4A2TA0A5A2 114 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 APPP05067 770 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 LRRC2Q9BYS8 371 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
SMPD4-219ENST00000491128 XDHP47989 1333 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 PPEF1O14829 653 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-219ENST00000491128 PRKAB2O43741 272 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 AK2P54819 239 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
SMPD4-219ENST00000491128 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 KLRG2A4D1S0 409 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-219ENST00000491128 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 PRDX5P30044 214 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-219ENST00000491128 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
SMPD4-219ENST00000491128 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-219ENST00000491128 C2CD5Q86YS7 1000 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 ZNF384Q8TF68 577 aa16.65■□□□□ 0.26
SMPD4-219ENST00000491128 BBOX1O75936 387 aa16.64■□□□□ 0.25
SMPD4-219ENST00000491128 MBD4O95243 580 aa16.64■□□□□ 0.25
SMPD4-219ENST00000491128 FGAP02671 866 aa16.64■□□□□ 0.25
SMPD4-219ENST00000491128 GRIK5Q16478 980 aa16.64■□□□□ 0.25
SMPD4-219ENST00000491128 AIDAQ96BJ3 306 aa16.64■□□□□ 0.25
SMPD4-219ENST00000491128 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
SMPD4-219ENST00000491128 GGA1Q9UJY5 639 aa16.64■□□□□ 0.25
SMPD4-219ENST00000491128 DENND2AQ9ULE3 1009 aa16.64■□□□□ 0.25
SMPD4-219ENST00000491128 IRS2Q9Y4H2 1338 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 LARGE1O95461 756 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 CYP7A1P22680 504 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 PDE6BP35913 854 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 LRRFIP1Q32MZ4 808 aaKnown RBP16.63■□□□□ 0.25
SMPD4-219ENST00000491128 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 CRAMP1Q96RY5 1269 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-219ENST00000491128 EPB41L2O43491 1005 aaKnown RBP16.63■□□□□ 0.25
SMPD4-219ENST00000491128 UBE3CQ15386 1083 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 RUFY3Q7L099 469 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 TTC14Q96N46 770 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
SMPD4-219ENST00000491128 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-219ENST00000491128 NPR1P16066 1061 aa16.62■□□□□ 0.25
SMPD4-219ENST00000491128 KCNB2Q92953 911 aa16.62■□□□□ 0.25
SMPD4-219ENST00000491128 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
SMPD4-219ENST00000491128 ZSWIM6Q9HCJ5 1215 aa16.62■□□□□ 0.25
SMPD4-219ENST00000491128 CYP46A1Q9Y6A2 500 aa16.62■□□□□ 0.25
SMPD4-219ENST00000491128 DYNLL1P63167 89 aaKnown RBP16.62■□□□□ 0.25
SMPD4-219ENST00000491128 LEMD3Q9Y2U8 911 aa16.62■□□□□ 0.25
SMPD4-219ENST00000491128 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
SMPD4-219ENST00000491128 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
SMPD4-219ENST00000491128 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
SMPD4-219ENST00000491128 PKP1Q13835 747 aa16.61■□□□□ 0.25
SMPD4-219ENST00000491128 DOK7Q18PE1 504 aa16.61■□□□□ 0.25
SMPD4-219ENST00000491128 SDR42E1Q8WUS8 393 aa16.61■□□□□ 0.25
SMPD4-219ENST00000491128 MASTLQ96GX5 879 aa16.61■□□□□ 0.25
SMPD4-219ENST00000491128 H0YIN7 160 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 BLOC1S2Q6QNY1 142 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 ATP6V0A2Q9Y487 856 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 MECOMQ03112 1051 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 SLC4A8Q2Y0W8 1093 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-219ENST00000491128 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-219ENST00000491128 IL17RAQ96F46 866 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 NEK1Q96PY6 1258 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-219ENST00000491128 ANKRD31Q8N7Z5 1873 aa16.6■□□□□ 0.25
SMPD4-219ENST00000491128 ARAP2Q8WZ64 1704 aa16.59■□□□□ 0.25
SMPD4-219ENST00000491128 E7EWF7 191 aa16.59■□□□□ 0.25
SMPD4-219ENST00000491128 SP8Q8IXZ3 490 aa16.59■□□□□ 0.25
SMPD4-219ENST00000491128 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
SMPD4-219ENST00000491128 EPB41L4AQ9HCS5 686 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-219ENST00000491128 CD209Q9NNX6 404 aa16.59■□□□□ 0.25
SMPD4-219ENST00000491128 STK3Q13188 491 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms