RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 IL17RAQ96F46 866 aa7.2□□□□□ -1.26
VPS41-214ENST00000490924 PRAM1Q96QH2 718 aa7.2□□□□□ -1.26
VPS41-214ENST00000490924 NIFKQ9BYG3 293 aaKnown RBP7.2□□□□□ -1.26
VPS41-214ENST00000490924 CWC22Q9HCG8 908 aaKnown RBP7.2□□□□□ -1.26
VPS41-214ENST00000490924 POLKQ9UBT6 870 aa7.2□□□□□ -1.26
VPS41-214ENST00000490924 PRR12Q9ULL5 1215 aa7.2□□□□□ -1.26
VPS41-214ENST00000490924 CPS1P31327 1500 aa7.2□□□□□ -1.26
VPS41-214ENST00000490924 PTPRCP08575 1304 aa7.2□□□□□ -1.26
VPS41-214ENST00000490924 CDC45O75419 566 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 IL13P35225 146 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 PLA2G4AP47712 749 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 NUCB2P80303 420 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 OXLD1Q5BKU9 147 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 NLRP8Q86W28 1048 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 TSR2Q969E8 191 aaKnown RBP7.19□□□□□ -1.26
VPS41-214ENST00000490924 BTBD6Q96KE9 485 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 CDK19Q9BWU1 502 aa7.19□□□□□ -1.26
VPS41-214ENST00000490924 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
VPS41-214ENST00000490924 RIMS2Q9UQ26 1411 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 NEURL1BA8MQ27 555 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 ATXN7O15265 892 aaPredicted RBP7.18□□□□□ -1.26
VPS41-214ENST00000490924 XRCC6P12956 609 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS41-214ENST00000490924 ADH6P28332 368 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 TNNT2P45379 298 aaPredicted RBP7.18□□□□□ -1.26
VPS41-214ENST00000490924 TERF1P54274 439 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
VPS41-214ENST00000490924 KLHL40Q2TBA0 621 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 BCL2L13Q9BXK5 485 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 CRISPLD1Q9H336 500 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 GGNBP2Q9H3C7 697 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 DCTPP1Q9H773 170 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 NEUROD4Q9HD90 331 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 RTL1A6NKG5 1358 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 MON2Q7Z3U7 1717 aa7.18□□□□□ -1.26
VPS41-214ENST00000490924 EPXP11678 715 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 ALAS2P22557 587 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 PRKAR2BP31323 418 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 MCM2P49736 904 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 KIF2CQ99661 725 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 CDCA7Q9BWT1 371 aaPredicted RBP7.17□□□□□ -1.26
VPS41-214ENST00000490924 BABAM1Q9NWV8 329 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 TNNQ9UQP3 1299 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 TTC21BQ7Z4L5 1316 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 USP31Q70CQ4 1352 aa7.17□□□□□ -1.26
VPS41-214ENST00000490924 C3P01024 1663 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 HTATSF1O43719 755 aaKnown RBP7.16□□□□□ -1.26
VPS41-214ENST00000490924 BNIP3LO60238 219 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 HSP90AB1P08238 724 aaKnown RBP7.16□□□□□ -1.26
VPS41-214ENST00000490924 HSPA2P54652 639 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 CTBSQ01459 385 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 CASC1Q6TDU7 716 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 BICDL1Q6ZP65 573 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 ANKRD44Q8N8A2 993 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 CCDC85AQ96PX6 553 aaPredicted RBP7.16□□□□□ -1.26
VPS41-214ENST00000490924 CHMP4AQ9BY43 222 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 ZCCHC2Q9C0B9 1178 aaKnown RBP7.16□□□□□ -1.26
VPS41-214ENST00000490924 FHDC1Q9C0D6 1143 aaPredicted RBP7.16□□□□□ -1.26
VPS41-214ENST00000490924 GRPEL1Q9HAV7 217 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 CABP1Q9NZU7 370 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 SSH2Q76I76 1423 aa7.16□□□□□ -1.26
VPS41-214ENST00000490924 C1QTNF9BB2RNN3 333 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 CHL1O00533 1208 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 KHNYNO15037 678 aaKnown RBP7.15□□□□□ -1.26
VPS41-214ENST00000490924 HMMRO75330 724 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 REC8O95072 547 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 RAPGEF3O95398 923 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 APBA3O96018 575 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 CYP2E1P05181 493 aaPredicted RBP7.15□□□□□ -1.26
VPS41-214ENST00000490924 COL8A1P27658 744 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 ZNF445P59923 1031 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 ANAPC15P60006 121 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 CCDC173Q0VFZ6 552 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 TWISTNBQ3B726 338 aaPredicted RBP7.15□□□□□ -1.26
VPS41-214ENST00000490924 MAP7D1Q3KQU3 841 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 PRRT3Q5FWE3 981 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 TNPO1Q92973 898 aaKnown RBP7.15□□□□□ -1.26
VPS41-214ENST00000490924 COG3Q96JB2 828 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 PPP1R9BQ96SB3 815 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 ETNK1Q9HBU6 452 aa7.15□□□□□ -1.26
VPS41-214ENST00000490924 AVENQ9NQS1 362 aaPredicted RBP7.15□□□□□ -1.26
VPS41-214ENST00000490924 OVOS2A0A0J9YW53 1432 aa7.15□□□□□ -1.27
VPS41-214ENST00000490924 OVOS2Q6IE36 1432 aa7.15□□□□□ -1.27
VPS41-214ENST00000490924 ATP10DQ9P241 1426 aa7.15□□□□□ -1.27
VPS41-214ENST00000490924 NRXN3Q9Y4C0 1643 aa7.15□□□□□ -1.27
VPS41-214ENST00000490924 RGS12O14924 1447 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 ITGB2P05107 769 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 MCM5P33992 734 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 KDRP35968 1356 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 AKAP12Q02952 1782 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 AOX1Q06278 1338 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 DIP2AQ14689 1571 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 TTC22Q5TAA0 569 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 Q8N3U1 123 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 MTMR14Q8NCE2 650 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 LNPKQ9C0E8 428 aa7.14□□□□□ -1.27
VPS41-214ENST00000490924 RGPD1P0DJD0 1748 aa7.13□□□□□ -1.27
VPS41-214ENST00000490924 NALCNQ8IZF0 1738 aa7.13□□□□□ -1.27
VPS41-214ENST00000490924 PXDNLA1KZ92 1463 aa7.13□□□□□ -1.27
VPS41-214ENST00000490924 PTPRUQ92729 1446 aa7.13□□□□□ -1.27
VPS41-214ENST00000490924 TTC21AQ8NDW8 1320 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms