RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 CCSER2Q9H7U1 834 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 ZFATQ9P243 1243 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 XIRP1Q702N8 1843 aaKnown RBP7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 WRNQ14191 1432 aaPredicted RBP eCLIP7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 IQGAP2Q13576 1575 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 LRP6O75581 1613 aa7.49□□□□□ -1.21
SSX2IP-208ENST00000490476 LOC105371045A0A1W2PR82 267 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 BNIP3LO60238 219 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 CD33P20138 364 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 GRM2Q14416 872 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 NPAS3Q8IXF0 933 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 BHMTQ93088 406 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 GTPBP3Q969Y2 492 aaKnown RBP7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 MARK1Q9P0L2 795 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 FAM8A1Q9UBU6 413 aa7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.48□□□□□ -1.21
SSX2IP-208ENST00000490476 MROH2AA6NES4 1674 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 DISP1Q96F81 1524 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 SPEM2Q0P670 501 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 NCAPG2Q86XI2 1143 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 TRIM22Q8IYM9 498 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 SREK1Q8WXA9 508 aaKnown RBP7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 SLC30A3Q99726 388 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 SUV39H2Q9H5I1 410 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 CAPN10Q9HC96 672 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
SSX2IP-208ENST00000490476 CHD4Q14839 1912 aa7.46□□□□□ -1.21
SSX2IP-208ENST00000490476 A0A1W2PP55 124 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 PSAPP07602 524 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 EDN3P14138 238 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 INSM1Q01101 510 aaPredicted RBP7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 UBAP2LQ14157 1087 aaKnown RBP7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 TAF1CQ15572 869 aaPredicted RBP7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 ZNF394Q53GI3 561 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 OR13H1Q8NG92 308 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 ACBD3Q9H3P7 528 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 IGFLR1Q9H665 355 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 PPP4R2Q9NY27 417 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 GGT7Q9UJ14 662 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 PCDHGB7Q9Y5F8 929 aa7.46□□□□□ -1.22
SSX2IP-208ENST00000490476 NPATQ14207 1427 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 ATP10AO60312 1499 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 FCGRTP55899 365 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 HS2ST1Q7LGA3 356 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 ZNF837Q96EG3 531 aaPredicted RBP7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 DRC1Q96MC2 740 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 NSUN5Q96P11 429 aaKnown RBP7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 TGIF2Q9GZN2 237 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 NXF1Q9UBU9 619 aaKnown RBP7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 HCN2Q9UL51 889 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 TTF2Q9UNY4 1162 aaKnown RBP7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 USP31Q70CQ4 1352 aa7.45□□□□□ -1.22
SSX2IP-208ENST00000490476 FAM135BQ49AJ0 1406 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 CDC14CA4D256 554 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 GPR25O00155 361 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 TRPA1O75762 1119 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 ACPPP15309 386 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 ITGA6P23229 1130 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 GSTT1P30711 240 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 TNNI2P48788 182 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 TBC1D8BQ0IIM8 1120 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 LAMC2Q13753 1193 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 COL13A1Q5TAT6 717 aaPredicted RBP7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 MEX3CQ5U5Q3 659 aaKnown RBP7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 PEAR1Q5VY43 1037 aaPredicted RBP7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 USP48Q86UV5 1035 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 SRCIN1Q9C0H9 1055 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 LIN7BQ9HAP6 207 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 TLR7Q9NYK1 1049 aaKnown RBP7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 SALL4Q9UJQ4 1053 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 AKAP2Q9Y2D5 859 aa7.44□□□□□ -1.22
SSX2IP-208ENST00000490476 NWD1Q149M9 1564 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 VEGFBP49765 207 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 MLLT1Q03111 559 aaPredicted RBP7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 PLAURQ03405 335 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 HYAL2Q12891 473 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 KIAA0319Q5VV43 1072 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 OSMRQ99650 979 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 NDFIP2Q9NV92 336 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 STK17AQ9UEE5 414 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 TRAK1Q9UPV9 953 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 JCADQ9P266 1359 aa7.43□□□□□ -1.22
SSX2IP-208ENST00000490476 BIVM-ERCC5R4GMW8 1640 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 F6X3S4 739 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 FGFR3P22607 806 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 DTHD1Q6ZMT9 781 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 HFE2Q6ZVN8 426 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 DHX32Q7L7V1 743 aaKnown RBP7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 ZNF654Q8IZM8 581 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 GLIS3Q8NEA6 775 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 ZKSCAN3Q9BRR0 538 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 OXCT2Q9BYC2 517 aaPredicted RBP7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 ATXN7L1Q9ULK2 861 aaPredicted RBP7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 INPP5FQ9Y2H2 1132 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 BCL9LQ86UU0 1499 aa7.42□□□□□ -1.22
SSX2IP-208ENST00000490476 SHPRHQ149N8 1683 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms