RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 LRRC37AA6NMS7 1700 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 EYSQ5T1H1 3165 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 PRUNE2Q8WUY3 3088 aa9.64□□□□□ -0.87
PDLIM1-203ENST00000490391 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 LAMB2P55268 1798 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 BTBD11A6QL63 1104 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 ERVV-1B6SEH8 477 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 SNRPA1P09661 255 aaKnown RBP9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 RPS12P25398 132 aaKnown RBP9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 KIF4BQ2VIQ3 1234 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 RBM26Q5T8P6 1007 aaKnown RBP9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 SUSD4Q5VX71 490 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 ZNF609O15014 1411 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
PDLIM1-203ENST00000490391 TAF1P21675 1872 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 UBE2Q2LH0YL09 131 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 GPTP24298 496 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 PANK3Q9H999 370 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 KCNQ5Q9NR82 932 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 PTPN22Q9Y2R2 807 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 ANKRD36CQ5JPF3 1778 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 KDM3BQ7LBC6 1761 aa9.62□□□□□ -0.87
PDLIM1-203ENST00000490391 MAP3K15Q6ZN16 1313 aa9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 SMAPO00193 183 aa9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 BBOX1O75936 387 aa9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 CAP1Q01518 475 aa9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 ZNF34Q8IZ26 560 aa9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 ZNF333Q96JL9 665 aa9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 TMX4Q9H1E5 349 aaPredicted RBP9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 DDX60Q8IY21 1712 aaKnown RBP9.61□□□□□ -0.87
PDLIM1-203ENST00000490391 SREBF2Q12772 1141 aa9.6□□□□□ -0.87
PDLIM1-203ENST00000490391 SLC10A5Q5PT55 438 aa9.6□□□□□ -0.87
PDLIM1-203ENST00000490391 ANGEL2Q5VTE6 544 aaKnown RBP9.6□□□□□ -0.87
PDLIM1-203ENST00000490391 TTLL7Q6ZT98 887 aa9.6□□□□□ -0.87
PDLIM1-203ENST00000490391 NLRP3Q96P20 1036 aa9.6□□□□□ -0.87
PDLIM1-203ENST00000490391 DBNDD1Q9H9R9 158 aa9.6□□□□□ -0.87
PDLIM1-203ENST00000490391 LAMB1P07942 1786 aa9.6□□□□□ -0.87
PDLIM1-203ENST00000490391 COL3A1P02461 1466 aaPredicted RBP9.59□□□□□ -0.87
PDLIM1-203ENST00000490391 ZNF280AP59817 542 aaPredicted RBP9.59□□□□□ -0.87
PDLIM1-203ENST00000490391 PRR20EP86478 221 aa9.59□□□□□ -0.87
PDLIM1-203ENST00000490391 PRR20CP86479 221 aa9.59□□□□□ -0.87
PDLIM1-203ENST00000490391 PRR20DP86480 221 aa9.59□□□□□ -0.87
PDLIM1-203ENST00000490391 PRR20BP86481 221 aa9.59□□□□□ -0.87
PDLIM1-203ENST00000490391 PRR20AP86496 221 aa9.59□□□□□ -0.87
PDLIM1-203ENST00000490391 SOX1O00570 391 aaPredicted RBP9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 ALDH1A1P00352 501 aa9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 VIL1P09327 827 aaKnown RBP9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 SLC19A1P41440 591 aa9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 SCARF1Q14162 830 aa9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 WASHC4Q2M389 1173 aa9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 COL25A1Q9BXS0 654 aaPredicted RBP9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 PSME4Q14997 1843 aa9.58□□□□□ -0.88
PDLIM1-203ENST00000490391 ECE2O60344 883 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 DIAPH1O60610 1272 aaKnown RBP9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 GRAPQ13588 217 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 PRAMEF18Q5VWM3 479 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 GRAPLQ8TC17 118 aaPredicted RBP9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 CD99L2Q8TCZ2 262 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 CDCA7LQ96GN5 454 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 POLR3GLQ9BT43 218 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 ZBTB3Q9H5J0 574 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 COL4A1P02462 1669 aa9.57□□□□□ -0.88
PDLIM1-203ENST00000490391 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 PTPN12Q05209 780 aaKnown RBP9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 TSR1Q2NL82 804 aaKnown RBP9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 PARP10Q53GL7 1025 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 AMER1Q5JTC6 1135 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 GIGYF2Q6Y7W6 1299 aaKnown RBP9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 NGEFQ8N5V2 710 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 DDX12PQ92771 950 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 EMID1Q96A84 441 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 ERO1AQ96HE7 468 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 PHACTR3Q96KR7 559 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 GMLQ99445 158 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 EFCC1Q9HA90 598 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 POLLQ9UGP5 575 aa9.56□□□□□ -0.88
PDLIM1-203ENST00000490391 LDLRAD1Q5T700 205 aa9.55□□□□□ -0.88
PDLIM1-203ENST00000490391 KIF6Q6ZMV9 814 aa9.55□□□□□ -0.88
PDLIM1-203ENST00000490391 PPP1R42Q7Z4L9 355 aa9.55□□□□□ -0.88
PDLIM1-203ENST00000490391 ZNF598Q86UK7 904 aaKnown RBP9.55□□□□□ -0.88
PDLIM1-203ENST00000490391 A0A1W2PPC1 479 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 C3orf80F5H4A9 247 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 HCLS1P14317 486 aaPredicted RBP9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 PRSS12P56730 875 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 COPS2P61201 443 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 DDX46Q7L014 1031 aaKnown RBP9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 TMC4Q7Z404 712 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 AGBL3Q8NEM8 1001 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 NECTIN2Q92692 538 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 TATDN2Q93075 761 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 SHISA4Q96DD7 197 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 UTP14AQ9BVJ6 771 aaKnown RBP9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 MYOZ2Q9NPC6 264 aa9.54□□□□□ -0.88
PDLIM1-203ENST00000490391 MANSC4A6NHS7 340 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms