RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 PNMA2Q9UL42 364 aa3.48□□□□□ -1.85
EPB41-212ENST00000490308 PARP3Q9Y6F1 533 aa3.48□□□□□ -1.85
EPB41-212ENST00000490308 TGFBR3LH3BV60 316 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 AGRPO00253 132 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 GREM1O60565 184 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 IFIT2P09913 472 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 NBPF7P0C2Y1 421 aaPredicted RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 COL6A1P12109 1028 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 MYCLP1P12525 358 aaPredicted RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 MCCP23508 829 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 CALRP27797 417 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 GIPRP48546 466 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 CASP7P55210 303 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 RAB15P59190 212 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 PURAQ00577 322 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 SSRP1Q08945 709 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 PICALMQ13492 652 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 MLECQ14165 292 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 TLR1Q15399 786 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 LRRFIP1Q32MZ4 808 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 CCDC174Q6PII3 467 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 Q6ZNB5 142 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 EEPD1Q7L9B9 569 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 GALNT12Q8IXK2 581 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 IFNL3Q8IZI9 196 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 REXO1Q8N1G1 1221 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 PPM1KQ8N3J5 372 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 C19orf47Q8N9M1 422 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 TEX19Q8NA77 164 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 EPS8L3Q8TE67 593 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 XAGE2Q96GT9 111 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 SHDQ96IW2 340 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 EAF1Q96JC9 268 aaPredicted RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 CEP63Q96MT8 703 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 RUSC1Q9BVN2 902 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 NIFKQ9BYG3 293 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 ZHX3Q9H4I2 956 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 OSBPL3Q9H4L5 887 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 ETNK1Q9HBU6 452 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 CASS4Q9NQ75 786 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 PRDM11Q9NQV5 511 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 STRN4Q9NRL3 753 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 INTS7Q9NVH2 962 aaKnown RBP3.47□□□□□ -1.85
EPB41-212ENST00000490308 PGPEP1Q9NXJ5 209 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 CABP1Q9NZU7 370 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 ZNF69Q9UC07 566 aa3.47□□□□□ -1.85
EPB41-212ENST00000490308 EML1O00423 815 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 KCNQ2O43526 872 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 BRINP1O60477 761 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 DDAH1O94760 285 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 MICAL2O94851 1124 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 NPTXRO95502 500 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 BPNT1O95861 308 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 NAT2P11245 290 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 MCM4P33991 863 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 ARSDP51689 593 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 GUCY2FP51841 1108 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 NEK2P51955 445 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 HNRNPUQ00839 825 aaKnown RBP eCLIP3.46□□□□□ -1.86
EPB41-212ENST00000490308 KCNC4Q03721 635 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 SQSTM1Q13501 440 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 MAP7Q14244 749 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 SLC9A5Q14940 896 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 NBPF1Q3BBV0 1214 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 FOXD4L6Q3SYB3 417 aaPredicted RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 INTS6LQ5JSJ4 861 aaKnown RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 KIAA0319Q5VV43 1072 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 RNF219Q5W0B1 726 aaPredicted RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 FBXW10Q5XX13 1052 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 NXNQ6DKJ4 435 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 ZNF280DQ6N043 979 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 CCDC70Q6NSX1 233 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 FBXL19Q6PCT2 694 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 FOXD4L3Q6VB84 417 aaPredicted RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 FAM196AQ6ZSG2 479 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 DDX46Q7L014 1031 aaKnown RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 HDGFL2Q7Z4V5 671 aaPredicted RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 DDX42Q86XP3 938 aaKnown RBP eCLIP3.46□□□□□ -1.86
EPB41-212ENST00000490308 PGBD3Q8N328 593 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 GOLM1Q8NBJ4 401 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 RBBP8NLQ8NC74 664 aaPredicted RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 SVIPQ8NHG7 77 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 RIN3Q8TB24 985 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 SNRNP27Q8WVK2 155 aaKnown RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 L3MBTL2Q969R5 705 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 EMID1Q96A84 441 aaPredicted RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 KIF2CQ99661 725 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 ESYT1Q9BSJ8 1104 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 MTA3Q9BTC8 594 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 LRRC3Q9BY71 257 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 PHACTR1Q9C0D0 580 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 EHD4Q9H223 541 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 NPHS2Q9NP85 383 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 ATG3Q9NT62 314 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 THRAP3Q9Y2W1 955 aaKnown RBP3.46□□□□□ -1.86
EPB41-212ENST00000490308 PTCH2Q9Y6C5 1203 aa3.46□□□□□ -1.86
EPB41-212ENST00000490308 DNAJC25-GNG10A0A024R161 153 aa3.45□□□□□ -1.86
EPB41-212ENST00000490308 UBAP1LF5GYI3 381 aa3.45□□□□□ -1.86
EPB41-212ENST00000490308 PDE8AO60658 829 aa3.45□□□□□ -1.86
EPB41-212ENST00000490308 FGAP02671 866 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms