RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 U2AF1Q01081 240 aaKnown RBP eCLIP5.23□□□□□ -1.57
RPN1-205ENST00000490166 ITPK1Q13572 414 aa5.23□□□□□ -1.57
RPN1-205ENST00000490166 NPAS3Q8IXF0 933 aa5.23□□□□□ -1.57
RPN1-205ENST00000490166 RTF1Q92541 710 aaKnown RBP5.23□□□□□ -1.57
RPN1-205ENST00000490166 SRP68Q9UHB9 627 aaKnown RBP5.23□□□□□ -1.57
RPN1-205ENST00000490166 NUDCQ9Y266 331 aa5.23□□□□□ -1.57
RPN1-205ENST00000490166 KAT6BQ8WYB5 2073 aa5.23□□□□□ -1.57
RPN1-205ENST00000490166 C4BP0C0L5 1744 aa5.23□□□□□ -1.57
RPN1-205ENST00000490166 CICQ96RK0 1608 aaPredicted RBP5.23□□□□□ -1.57
RPN1-205ENST00000490166 MAPK8IP3Q9UPT6 1336 aa5.23□□□□□ -1.57
RPN1-205ENST00000490166 PALM3A6NDB9 673 aaPredicted RBP5.22□□□□□ -1.57
RPN1-205ENST00000490166 CRKLP46109 303 aaKnown RBP5.22□□□□□ -1.57
RPN1-205ENST00000490166 ERVK-9P63128 1117 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 RELBQ01201 579 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 SLC39A6Q13433 755 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 CC2D2BQ6DHV5 1058 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 PHTF2Q8N3S3 785 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 CYLDQ9NQC7 956 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 ATG3Q9NT62 314 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 NXF1Q9UBU9 619 aaKnown RBP5.22□□□□□ -1.57
RPN1-205ENST00000490166 PCDHB11Q9Y5F2 797 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 ANKRD26Q9UPS8 1709 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 TOGARAM1Q9Y4F4 1720 aa5.22□□□□□ -1.57
RPN1-205ENST00000490166 SHANK3Q9BYB0 1731 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 A0A0G2JLW4 131 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 TTLL8A6PVC2 850 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 ERVV-2B6SEH9 535 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 ATP5J2-PTCD1G3V325 749 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 TERTO14746 1132 aaKnown RBP5.21□□□□□ -1.58
RPN1-205ENST00000490166 ATP9BO43861 1147 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 GTF2E1P29083 439 aaPredicted RBP5.21□□□□□ -1.58
RPN1-205ENST00000490166 PRKAR2BP31323 418 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 PTGIRP43119 386 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.21□□□□□ -1.583e-13■□□□□ 8.2
RPN1-205ENST00000490166 SLFNL1Q499Z3 407 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 AKAP4Q5JQC9 854 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 USPL1Q5W0Q7 1092 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 TREML4Q6UXN2 200 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 PLEKHM2Q8IWE5 1019 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 DNAJC10Q8IXB1 793 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 NGEFQ8N5V2 710 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 PBXIP1Q96AQ6 731 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 AGBL1Q96MI9 1066 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 RNF181Q9P0P0 153 aa5.21□□□□□ -1.58
RPN1-205ENST00000490166 MAFBQ9Y5Q3 323 aaPredicted RBP5.21□□□□□ -1.58
RPN1-205ENST00000490166 PKD1L3Q7Z443 1732 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 MAP3K5Q99683 1374 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 LZTS3O60299 673 aaPredicted RBP5.2□□□□□ -1.58
RPN1-205ENST00000490166 WFS1O76024 890 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 DPEP1P16444 411 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 CHRNA5P30532 468 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 PIP4K2AP48426 406 aaPredicted RBP5.2□□□□□ -1.58
RPN1-205ENST00000490166 C1QTNF8P60827 252 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 TBC1D9Q6ZT07 1266 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 AMIGO3Q86WK7 504 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 NLGN1Q8N2Q7 840 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 GAS2L2Q8NHY3 880 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 ZNF622Q969S3 477 aaKnown RBP eCLIP5.2□□□□□ -1.58
RPN1-205ENST00000490166 TFIP11Q9UBB9 837 aaKnown RBP5.2□□□□□ -1.58
RPN1-205ENST00000490166 CD2APQ9Y5K6 639 aa5.2□□□□□ -1.58
RPN1-205ENST00000490166 KDM6AO15550 1401 aaPredicted RBP5.2□□□□□ -1.58
RPN1-205ENST00000490166 COL15A1P39059 1388 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 TUBGCP6Q96RT7 1819 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 GNAT3A8MTJ3 354 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 RNMTO43148 476 aaKnown RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 STARD3NLO95772 234 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 MYCP01106 439 aaPredicted RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 RASSF7Q02833 373 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 NFX1Q12986 1120 aaKnown RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 USP4Q13107 963 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 MTHFSDQ2M296 383 aaKnown RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 MAP7D1Q3KQU3 841 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 DALRD3Q5D0E6 543 aaKnown RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 CYP2U1Q7Z449 544 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 RNF135Q8IUD6 432 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 INSM2Q96T92 566 aaPredicted RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 ZNF395Q9H8N7 513 aaPredicted RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 SLC52A2Q9HAB3 445 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 LGR6Q9HBX8 967 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 POLMQ9NP87 494 aaPredicted RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 DNMT3LQ9UJW3 386 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 LAS1LQ9Y4W2 734 aaKnown RBP5.19□□□□□ -1.58
RPN1-205ENST00000490166 CNTNAP4Q9C0A0 1308 aa5.19□□□□□ -1.58
RPN1-205ENST00000490166 LY75O60449 1722 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 BTBD11A6QL63 1104 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 SOBPA7XYQ1 873 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 PIK3CDO00329 1044 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 RPS6KA4O75676 772 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 GYS1P13807 737 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 IL13P35225 146 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 CTSOP43234 321 aaPredicted RBP5.18□□□□□ -1.58
RPN1-205ENST00000490166 ST5P78524 1137 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 WDR43Q15061 677 aaKnown RBP eCLIP5.18□□□□□ -1.58
RPN1-205ENST00000490166 C9orf131Q5VYM1 1079 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 MCM10Q7L590 875 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 C2CD5Q86YS7 1000 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 KDF1Q8NAX2 398 aaPredicted RBP5.18□□□□□ -1.58
RPN1-205ENST00000490166 CCDC85AQ96PX6 553 aaPredicted RBP5.18□□□□□ -1.58
RPN1-205ENST00000490166 FMNL2Q96PY5 1086 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 PIM2Q9P1W9 311 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms