RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 NUCB1Q02818 461 aa12.95□□□□□ -0.34
LINC01140-207ENST00000490006 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
LINC01140-207ENST00000490006 CCDC102BQ68D86 513 aa12.95□□□□□ -0.34
LINC01140-207ENST00000490006 CENPQQ7L2Z9 268 aaPredicted RBP12.95□□□□□ -0.34
LINC01140-207ENST00000490006 CD209Q9NNX6 404 aa12.95□□□□□ -0.34
LINC01140-207ENST00000490006 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
LINC01140-207ENST00000490006 DBNLQ9UJU6 430 aaKnown RBP12.95□□□□□ -0.34
LINC01140-207ENST00000490006 GTF2IP78347 998 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 ARFGEF1Q9Y6D6 1849 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
LINC01140-207ENST00000490006 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 ZNRF3Q9ULT6 936 aa12.94□□□□□ -0.34
LINC01140-207ENST00000490006 CHD4Q14839 1912 aa12.93□□□□□ -0.34
LINC01140-207ENST00000490006 MAP4K4O95819 1239 aaPredicted RBP12.93□□□□□ -0.34
LINC01140-207ENST00000490006 RGS3P49796 1198 aa12.93□□□□□ -0.34
LINC01140-207ENST00000490006 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
LINC01140-207ENST00000490006 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
LINC01140-207ENST00000490006 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
LINC01140-207ENST00000490006 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
LINC01140-207ENST00000490006 LTBP3Q9NS15 1303 aa12.92□□□□□ -0.34
LINC01140-207ENST00000490006 FER1L6Q2WGJ9 1857 aa12.92□□□□□ -0.34
LINC01140-207ENST00000490006 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
LINC01140-207ENST00000490006 F8W031 263 aaPredicted RBP12.92□□□□□ -0.34
LINC01140-207ENST00000490006 UQCRFS1P1P0C7P4 283 aa12.92□□□□□ -0.34
LINC01140-207ENST00000490006 PI16Q6UXB8 463 aa12.92□□□□□ -0.34
LINC01140-207ENST00000490006 C15orf52Q6ZUT6 534 aaKnown RBP12.92□□□□□ -0.34
LINC01140-207ENST00000490006 DNAJC2Q99543 621 aaKnown RBP12.92□□□□□ -0.34
LINC01140-207ENST00000490006 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 PSMD14O00487 310 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 PDE4AP27815 886 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 CXCL9Q07325 125 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 SCARF1Q14162 830 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 CIAPIN1Q6FI81 312 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 TBC1D9Q6ZT07 1266 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
LINC01140-207ENST00000490006 ZNF526Q8TF50 670 aaPredicted RBP12.91□□□□□ -0.34
LINC01140-207ENST00000490006 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 ABCF2Q9UG63 623 aa12.91□□□□□ -0.34
LINC01140-207ENST00000490006 IRS2Q9Y4H2 1338 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 ZNF609O15014 1411 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 USP17L3A6NCW0 530 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 USP17L4A6NCW7 530 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
LINC01140-207ENST00000490006 IL1R1P14778 569 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 MX1P20591 662 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 TNIP1Q15025 636 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 USP17L1Q7RTZ2 530 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 HMG20BQ9P0W2 317 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 DENND2AQ9ULE3 1009 aa12.9□□□□□ -0.34
LINC01140-207ENST00000490006 SBF1O95248 1867 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 LRRC37AA6NMS7 1700 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 MCAMP43121 646 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 ZAP70P43403 619 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 CLCN6P51797 869 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 PDE1AP54750 535 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 RASGRF1Q13972 1273 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 PLEKHM2Q8IWE5 1019 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 SPATA5Q8NB90 893 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
LINC01140-207ENST00000490006 DUOX1Q9NRD9 1551 aa12.89□□□□□ -0.35
LINC01140-207ENST00000490006 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
LINC01140-207ENST00000490006 FZD9O00144 591 aa12.88□□□□□ -0.35
LINC01140-207ENST00000490006 GOLIM4O00461 696 aa12.88□□□□□ -0.35
LINC01140-207ENST00000490006 ATP5JP18859 108 aa12.88□□□□□ -0.35
LINC01140-207ENST00000490006 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
LINC01140-207ENST00000490006 LRP2BPQ9P2M1 347 aa12.88□□□□□ -0.35
LINC01140-207ENST00000490006 UTRNP46939 3433 aa12.88□□□□□ -0.35
LINC01140-207ENST00000490006 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 ERC2O15083 957 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
LINC01140-207ENST00000490006 GRIK5Q16478 980 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 MFSD14BQ5SR56 506 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 KIAA0825Q8IV33 1275 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 RILPL2Q969X0 211 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 ANTXR1Q9H6X2 564 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 A0A1B0GUL6 1792 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 COL4A5P29400 1685 aa12.87□□□□□ -0.35
LINC01140-207ENST00000490006 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
LINC01140-207ENST00000490006 ARID4AP29374 1257 aaPredicted RBP12.86□□□□□ -0.35
LINC01140-207ENST00000490006 SCNN1DP51172 638 aa12.86□□□□□ -0.35
LINC01140-207ENST00000490006 RBM5P52756 815 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01140-207ENST00000490006 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
LINC01140-207ENST00000490006 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
LINC01140-207ENST00000490006 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
LINC01140-207ENST00000490006 WDR66Q8TBY9 1149 aa12.86□□□□□ -0.35
LINC01140-207ENST00000490006 LTBP1Q14766 1721 aa12.86□□□□□ -0.35
LINC01140-207ENST00000490006 SEMA3EO15041 775 aa12.85□□□□□ -0.35
LINC01140-207ENST00000490006 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
LINC01140-207ENST00000490006 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
LINC01140-207ENST00000490006 CYP2E1P05181 493 aaPredicted RBP12.85□□□□□ -0.35
LINC01140-207ENST00000490006 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms